RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PLEKHG6Q3KR16 790 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 FAM133BQ5BKY9 247 aaKnown RBP11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 EFHC1Q5JVL4 640 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 DENND1BQ6P3S1 775 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 IL27RAQ6UWB1 636 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 ADIPOR2Q86V24 386 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 SORCS1Q8WY21 1168 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 TTC17Q96AE7 1141 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 SLC39A13Q96H72 371 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 BTN2A3PQ96KV6 586 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 CRACR2AQ9BSW2 395 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 GTPBP2Q9BX10 602 aaKnown RBP11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 GPR174Q9BXC1 333 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 LHX5Q9H2C1 402 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 DNAAF2Q9NVR5 837 aaKnown RBP11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 NAALADL1Q9UQQ1 740 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 CEP83Q9Y592 693 aa11.29□□□□□ -0.6
VTI1BP3-201ENST00000550220 THADAQ6YHU6 1953 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 MYO16Q9Y6X6 1858 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 PAPSS1O43252 624 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 DNTTP04053 509 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 FYNP06241 537 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 SRPRAP08240 638 aaKnown RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 SLC9A1P19634 815 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 PRKCHP24723 683 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ERCC5P28715 1186 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 KRT9P35527 623 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 CDK17Q00537 523 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ZNF252P-AS1Q0IIN9 211 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 PDCLQ13371 301 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 SLC12A1Q13621 1099 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 CDH18Q13634 790 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 PTPRNQ16849 979 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 TTC31Q49AM3 519 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ZDHHC17Q8IUH5 632 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 CYB5D2Q8WUJ1 264 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 SHC3Q92529 594 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 SLC6A17Q9H1V8 727 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 SGK2Q9HBY8 427 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 KIAA1522Q9P206 1035 aaPredicted RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 PCDHGC3Q9UN70 934 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 NCKAP1Q9Y2A7 1128 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 EML5Q05BV3 1969 aa11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 ATXN2Q99700 1313 aaKnown RBP11.28□□□□□ -0.6
VTI1BP3-201ENST00000550220 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 KCNJ18B7U540 433 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 E5RJQ4 531 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 H0Y626 953 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 BCAT2O15382 392 aaPredicted RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 HSF2BPO75031 334 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 TRIM16O95361 564 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 TRUB2O95900 331 aaKnown RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 ABCB4P21439 1286 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 PON1P27169 355 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC6A4P31645 630 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 CCR1P32246 355 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 NNMTP40261 264 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 SULT2A1Q06520 285 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 ARHGAP44Q17R89 818 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 DCAF6Q58WW2 860 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 ACBD5Q5T8D3 534 aaPredicted RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 DCAF12L1Q5VU92 463 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF776Q68DI1 518 aaPredicted RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 NADSYN1Q6IA69 706 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 C11orf57Q6ZUT1 292 aaPredicted RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 USP30Q70CQ3 517 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 TAC4Q86UU9 113 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 CARNMT1Q8N4J0 409 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 DEFB124Q8NES8 71 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 ERLEC1Q96DZ1 483 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 PPP1R13BQ96KQ4 1090 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 BTBD1Q9H0C5 482 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 CLSTN2Q9H4D0 955 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 SYNCQ9H7C4 482 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 PRSS16Q9NQE7 514 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 RRN3Q9NYV6 651 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 STIM2Q9P246 746 aa11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 TPX2Q9ULW0 747 aaKnown RBP11.27□□□□□ -0.61
VTI1BP3-201ENST00000550220 EPG5Q9HCE0 2579 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 KCNU1A8MYU2 1149 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 F5H5T6 163 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 LUC7L3O95232 432 aaKnown RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 CER1O95813 267 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 CALCAP01258 141 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 IGLV3-25P01717 112 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 HLA-EP13747 358 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms