RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 AMHR2Q16671 573 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 IL31Q6EBC2 164 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 BRSK2Q8IWQ3 736 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 RNF157Q96PX1 679 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 MRPL1Q9BYD6 325 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 CAB39LQ9H9S4 337 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 LMCD1Q9NZU5 365 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 TMEM216Q9P0N5 145 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 MFHAS1Q9Y4C4 1052 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 COMMD3-BMI1R4GMX3 469 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 HMX2A2RU54 273 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 STX16-NPEPL1H3BU86 382 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 KLHL2O95198 593 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 SRGAP2BP0DMP2 458 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 MGAT1P26572 445 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 CCR10P46092 362 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 IDH3AP50213 366 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 ZNF132P52740 706 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 PTPN11Q06124 597 aaPredicted RBP11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 FLOT2Q14254 428 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 TLR1Q15399 786 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 TMCO4Q5TGY1 634 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 HEATR6Q6AI08 1181 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 WDR49Q8IV35 697 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 CMTM5Q96DZ9 223 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 CDRT15Q96T59 188 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 ZNF518BQ9C0D4 1074 aa11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 LIN28AQ9H9Z2 209 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 HEMK1Q9Y5R4 338 aaPredicted RBP11.04□□□□□ -0.64
SMARCC2-208ENST00000550150 CSPG5O95196 566 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 STBD1O95210 358 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 NFICP08651 508 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ITGAXP20702 1163 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 EPHA3P29320 983 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 CAP1Q01518 475 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 WASHC5Q12768 1159 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 PDE1CQ14123 709 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 DLG2Q15700 870 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 TEDDM1Q5T9Z0 273 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 FAM183BPQ6ZVS7 135 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ZNF781Q8N8C0 355 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 CDKL2Q92772 493 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 KCNN1Q92952 543 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 DCUN1D1Q96GG9 259 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 LENG8Q96PV6 779 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 LGMNQ99538 433 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 KLF11O14901 512 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 TFE3P19532 575 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 GALK1P51570 392 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 HUNKP57058 714 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 CLDN10P78369 228 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 NADK2Q4G0N4 442 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ANKRD20A4Q4UJ75 823 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 GJC2Q5T442 439 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 KCNT2Q6UVM3 1135 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SAPCD2Q86UD0 394 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SNX32Q86XE0 403 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 CMASQ8NFW8 434 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 APOL2Q9BQE5 337 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SDCBP2Q9H190 292 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 COG4Q9H9E3 785 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 USP29Q9HBJ7 922 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 XPNPEP3Q9NQH7 507 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 PDGFCQ9NRA1 345 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 DDX43Q9NXZ2 648 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ARHGAP26Q9UNA1 814 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SSX2IPQ9Y2D8 614 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ADCY6O43306 1168 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ALDOAP04075 364 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 EDNRBP24530 442 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SDC4P31431 198 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 CRHR1P34998 444 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 LY6KQ17RY6 165 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SLC9B1Q4ZJI4 515 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 EEF1DP3Q658K8 133 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 PQLC3Q8N755 202 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 NIPA2Q8N8Q9 360 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 PCDH19Q8TAB3 1148 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 TFB1MQ8WVM0 346 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 GPRASP2Q96D09 838 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 EBNA1BP2Q99848 306 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 LPIN3Q9BQK8 851 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 SNRNP25Q9BV90 132 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 MAP3K20Q9NYL2 800 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 ATXN10Q9UBB4 475 aa11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 MRPL42Q9Y6G3 142 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-208ENST00000550150 HNRNPCP07910 306 aaKnown RBP eCLIP11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 COX4I1P13073 169 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 SOX11P35716 441 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 FDFT1P37268 417 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 TMEM198Q66K66 360 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 TRNP1Q6NT89 227 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 MAVSQ7Z434 540 aa11.02□□□□□ -0.64
SMARCC2-208ENST00000550150 AMIGO2Q86SJ2 522 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms