RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ZNF445P59923 1031 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 LRMPQ12912 555 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 PNOCQ13519 176 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 ACAP1Q15027 740 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 TEAD4Q15561 434 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 COL28A1Q2UY09 1125 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 TMPRSS7Q7RTY8 843 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 KCTD13Q8WZ19 329 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 TFAP2BQ92481 460 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 CDC6Q99741 560 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 BTBD1Q9H0C5 482 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 CNGB3Q9NQW8 809 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 RAXQ9Y2V3 346 aa16.04■□□□□ 0.16
RAB5C-205ENST00000550013 URB1O60287 2271 aaKnown RBP16.04■□□□□ 0.16
RAB5C-205ENST00000550013 H0Y8X5 98 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 CALCAP01258 141 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 IGLV3-27P01718 113 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 DNTTP04053 509 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 SETSIPP0DME0 302 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 POLR2EP19388 210 aaKnown RBP16.03■□□□□ 0.16
RAB5C-205ENST00000550013 CD27P26842 260 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 PRCPP42785 496 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 GRIA4P48058 902 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 PMS1P54277 932 aaKnown RBP16.03■□□□□ 0.16
RAB5C-205ENST00000550013 YWHAEP62258 255 aaKnown RBP16.03■□□□□ 0.16
RAB5C-205ENST00000550013 PKDCCQ504Y2 493 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 FAM133BQ5BKY9 247 aaKnown RBP16.03■□□□□ 0.16
RAB5C-205ENST00000550013 PIK3R6Q5UE93 754 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 MSANTD2Q6P1R3 559 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 PDZD3Q86UT5 571 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 ORAI3Q9BRQ5 295 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 FBRSQ9HAH7 460 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 OSGEPQ9NPF4 335 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 STIM2Q9P246 746 aa16.03■□□□□ 0.16
RAB5C-205ENST00000550013 SLC16A3O15427 465 aaKnown RBP16.02■□□□□ 0.16
RAB5C-205ENST00000550013 ATP5BP06576 529 aaKnown RBP16.02■□□□□ 0.16
RAB5C-205ENST00000550013 IL9RQ01113 521 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 ZBTB16Q05516 673 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 SUZ12Q15022 739 aaKnown RBP16.02■□□□□ 0.16
RAB5C-205ENST00000550013 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.16
RAB5C-205ENST00000550013 CCDC157Q569K6 752 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 ZNF776Q68DI1 518 aaPredicted RBP16.02■□□□□ 0.16
RAB5C-205ENST00000550013 ANKRD40Q6AI12 368 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 NADSYN1Q6IA69 706 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 PMF1Q6P1K2 205 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 SCML4Q8N228 414 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 CLEC4CQ8WTT0 213 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 IGSF8Q969P0 613 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 MYO19Q96H55 970 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 LMLNQ96KR4 655 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 PRICKLE1Q96MT3 831 aaPredicted RBP16.02■□□□□ 0.16
RAB5C-205ENST00000550013 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 SGK2Q9HBY8 427 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 GDPD2Q9HCC8 539 aa16.02■□□□□ 0.16
RAB5C-205ENST00000550013 NYNRINQ9P2P1 1898 aaKnown RBP16.01■□□□□ 0.15
RAB5C-205ENST00000550013 FAM149AA5PLN7 773 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 TRIM49BA6NDI0 452 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 ACSL4O60488 711 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 IGHV4-34P06331 123 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 CTSKP43235 329 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 SLC11A2P49281 568 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 CCT8P50990 548 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 MPP7Q5T2T1 576 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 KIAA0895LQ68EN5 471 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 TMEM270Q6UE05 265 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 SLC35F5Q8WV83 523 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 HNRNPLLQ8WVV9 542 aaKnown RBP16.01■□□□□ 0.15
RAB5C-205ENST00000550013 SLC35C1Q96A29 364 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 TSG101Q99816 390 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 SCAND2PQ9GZW5 306 aaPredicted RBP16.01■□□□□ 0.15
RAB5C-205ENST00000550013 RSPH9Q9H1X1 276 aaPredicted RBP16.01■□□□□ 0.15
RAB5C-205ENST00000550013 PABPC3Q9H361 631 aaKnown RBP16.01■□□□□ 0.15
RAB5C-205ENST00000550013 SERGEFQ9UGK8 458 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 SUN2Q9UH99 717 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 KIAA1257Q9ULG3 409 aa16.01■□□□□ 0.15
RAB5C-205ENST00000550013 KNTC1P50748 2209 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 BPTFQ12830 3046 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 FAM47DPA6NHR8 397 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 M0QYV0 167 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 RNF225M0QZC1 329 aaPredicted RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 TNFSF14O43557 240 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 PCDHGA12O60330 932 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 LTFP02788 710 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 TBXAS1P24557 533 aaPredicted RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 BRD2P25440 801 aaKnown RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 CSKP41240 450 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 GRK6P43250 576 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 TBX4P57082 545 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 RPS24P62847 133 aaKnown RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 SOWAHCQ53LP3 525 aaPredicted RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 NUGGCQ68CJ6 796 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 MMS22LQ6ZRQ5 1243 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 ADAT2Q7Z6V5 191 aaKnown RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 MFN1Q8IWA4 741 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 UNC45BQ8IWX7 931 aa16■□□□□ 0.15
RAB5C-205ENST00000550013 DHX40Q8IX18 779 aaKnown RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 HJURPQ8NCD3 748 aaPredicted RBP16■□□□□ 0.15
RAB5C-205ENST00000550013 GANCQ8TET4 914 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms