RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 TJP2Q9UDY2 1190 aa13.95□□□□□ -0.18
GCN1-206ENST00000549815 AJAP1Q9UKB5 411 aaPredicted RBP13.95□□□□□ -0.18
GCN1-206ENST00000549815 INTS6Q9UL03 887 aaKnown RBP13.95□□□□□ -0.18
GCN1-206ENST00000549815 NFE2L3Q9Y4A8 694 aa13.95□□□□□ -0.18
GCN1-206ENST00000549815 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 SPEGQ15772 3267 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 THAP12O43422 761 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 MED7O43513 233 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 GJB3O75712 270 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 DLDP09622 509 aaKnown RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 PON1P27169 355 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 RPS24P62847 133 aaKnown RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 ARID5AQ03989 594 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 PDCLQ13371 301 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 MS4A13Q5J8X5 152 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 DPY19L2P1Q6NXN4 242 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 GBP6Q6ZN66 633 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 RGL4Q8IZJ4 473 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 MINDY1Q8N5J2 469 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 ZNF366Q8N895 744 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 MLKLQ8NB16 471 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 HJURPQ8NCD3 748 aaPredicted RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 OR2I1PQ8NGU4 316 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 FIBINQ8TAL6 211 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 TTC17Q96AE7 1141 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 FAM149B1Q96BN6 582 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 GTPBP2Q9BX10 602 aaKnown RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 POPDC2Q9HBU9 364 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 SIX2Q9NPC8 291 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 PRSS16Q9NQE7 514 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 DNAAF2Q9NVR5 837 aaKnown RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 SUSD2Q9UGT4 822 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 XPO7Q9UIA9 1087 aaKnown RBP13.94□□□□□ -0.18
GCN1-206ENST00000549815 PCDHGC3Q9UN70 934 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 PLA2G4CQ9UP65 541 aa13.94□□□□□ -0.18
GCN1-206ENST00000549815 METTL12A8MUP2 240 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 CD59P13987 128 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 TAF5Q15542 800 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 ARHGAP44Q17R89 818 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 EXOC3L4Q17RC7 722 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
GCN1-206ENST00000549815 DCAF6Q58WW2 860 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 FSCBQ5H9T9 825 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 SYCP2LQ5T4T6 812 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 DCAF12L1Q5VU92 463 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 CACUL1Q86Y37 369 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 ZNF557Q8N988 423 aaPredicted RBP13.93□□□□□ -0.18
GCN1-206ENST00000549815 C1orf216Q8TAB5 229 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 MRGPRX3Q96LB0 322 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 DDX50Q9BQ39 737 aaKnown RBP13.93□□□□□ -0.18
GCN1-206ENST00000549815 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 LHX5Q9H2C1 402 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 THAP9Q9H5L6 903 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 STIM2Q9P246 746 aa13.93□□□□□ -0.18
GCN1-206ENST00000549815 CAPN9O14815 690 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 OPHN1O60890 802 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 TRUB2O95900 331 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 TOP3BO95985 862 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 SYPP08247 313 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 ACADMP11310 421 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 POLR2EP19388 210 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 ATXN3P54252 364 aaPredicted RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 YWHAZP63104 245 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 BNC1Q01954 994 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 PLEKHG6Q3KR16 790 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 ZC3H12AQ5D1E8 599 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 MMS22LQ6ZRQ5 1243 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 CREBRFQ8IUR6 639 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 CFAP52Q8N1V2 620 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 HDDC3Q8N4P3 179 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 SLC2A13Q96QE2 648 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 CPXM1Q96SM3 734 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 PRMT1Q99873 361 aaKnown RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 TRIM62Q9BVG3 475 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 TMEM121BQ9BXQ6 578 aaPredicted RBP13.92□□□□□ -0.18
GCN1-206ENST00000549815 CLSTN2Q9H4D0 955 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 MTG2Q9H4K7 406 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 FBRSQ9HAH7 460 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
GCN1-206ENST00000549815 A0A1B0GTW7 788 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 MEI4A8MW99 385 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 LUC7L3O95232 432 aaKnown RBP13.91□□□□□ -0.18
GCN1-206ENST00000549815 MOCS2O96007 188 aaPredicted RBP13.91□□□□□ -0.18
GCN1-206ENST00000549815 ASLP04424 464 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 GLI1P08151 1106 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 GNSP15586 552 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 TACR2P21452 398 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 ACSL1P33121 698 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 CSKP41240 450 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 ZBTB16Q05516 673 aa13.91□□□□□ -0.18
GCN1-206ENST00000549815 FOXC1Q12948 553 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms