RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ATG14Q6ZNE5 492 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 CCDC186Q7Z3E2 898 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 SLC25A45Q8N413 288 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.31□□□□□ -0.92
UBE2N-203ENST00000549490 MFSD2AQ8NA29 543 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 HPS3Q969F9 1004 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 CDK5RAP1Q96SZ6 601 aaKnown RBP9.31□□□□□ -0.92
UBE2N-203ENST00000549490 IGSF5Q9NSI5 407 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 STARD5Q9NSY2 213 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 GGA2Q9UJY4 613 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 AHCTF1Q8WYP5 2266 aa9.31□□□□□ -0.92
UBE2N-203ENST00000549490 USP9YO00507 2555 aaPredicted RBP9.31□□□□□ -0.92
UBE2N-203ENST00000549490 ARID1BQ8NFD5 2236 aaPredicted RBP9.31□□□□□ -0.92
UBE2N-203ENST00000549490 TEP1Q99973 2627 aaKnown RBP9.3□□□□□ -0.92
UBE2N-203ENST00000549490 A0A1B0GVM2 712 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 A0A1W2PNU3 283 aaPredicted RBP9.3□□□□□ -0.92
UBE2N-203ENST00000549490 SLC12A8A0AV02 714 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 TGFB1I1O43294 461 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 SUV39H1O43463 412 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 SIN3BO75182 1162 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 RNASEH2AO75792 299 aaKnown RBP9.3□□□□□ -0.92
UBE2N-203ENST00000549490 BMP15O95972 392 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 ATP5BP06576 529 aaKnown RBP9.3□□□□□ -0.92
UBE2N-203ENST00000549490 PABPC1P11940 636 aaKnown RBP9.3□□□□□ -0.92
UBE2N-203ENST00000549490 GP1BBP13224 206 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 SFSWAPQ12872 951 aaKnown RBP9.3□□□□□ -0.92
UBE2N-203ENST00000549490 ARL13BQ3SXY8 428 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 LINC00303Q3SY05 128 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 ZNF667Q5HYK9 610 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 IGF2-ASQ6U949 168 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 TMC6Q7Z403 805 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 AHI1Q8N157 1196 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 MYO19Q96H55 970 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 SLC46A1Q96NT5 459 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 OMDQ99983 421 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 PNPLA8Q9NP80 782 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 AGPAT3Q9NRZ7 376 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 MARCH2Q9P0N8 246 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 FZD4Q9ULV1 537 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
UBE2N-203ENST00000549490 CLIC2O15247 247 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 EFSO43281 561 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 LATO43561 262 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 RNASEH1O60930 286 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CLSTN1O94985 981 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 VNN1O95497 513 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 AFPP02771 609 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CKMT1AP12532 417 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 MYF5P13349 255 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 ITGB6P18564 788 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 POLR2EP19388 210 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 DGKAP23743 735 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 RBMS1P29558 406 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 SLC8A1P32418 973 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CD70P32970 193 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CASP4P49662 377 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CYP2J2P51589 502 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 ADPRHP54922 357 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 PPP2CBP62714 309 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 PPP2CAP67775 309 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 ASIC1P78348 528 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CLN3Q13286 438 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 BIRC3Q13489 604 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 NCOA4Q13772 614 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 HNRNPA1L2Q32P51 320 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 NAPEPLDQ6IQ20 393 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 XKR5Q6UX68 686 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 STXBP4Q6ZWJ1 553 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 IQCHQ86VS3 1027 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 UNC93AQ86WB7 457 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 MMAAQ8IVH4 418 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CCDC65Q8IXS2 484 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 AADATQ8N5Z0 425 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 XXYLT1Q8NBI6 393 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 OR4C6Q8NH72 309 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 OR14C36Q8NHC7 312 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 WFDC5Q8TCV5 224 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 PLEKHO2Q8TD55 490 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 TMA16Q96EY4 203 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CYFIP2Q96F07 1278 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 PRR11Q96HE9 360 aaPredicted RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 TWNKQ96RR1 684 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 OSBPL2Q9H1P3 480 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 UCKL1Q9NWZ5 548 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 ARHGAP20Q9P2F6 1191 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 CCDC39Q9UFE4 941 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 STRIP2Q9ULQ0 834 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 TPX2Q9ULW0 747 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 SATB2Q9UPW6 733 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
UBE2N-203ENST00000549490 UTP20O75691 2785 aaKnown RBP9.29□□□□□ -0.92
UBE2N-203ENST00000549490 H3BQV1 296 aa9.28□□□□□ -0.92
UBE2N-203ENST00000549490 MAGEC1O60732 1142 aa9.28□□□□□ -0.92
UBE2N-203ENST00000549490 KIF20AO95235 890 aa9.28□□□□□ -0.92
UBE2N-203ENST00000549490 C4BPAP04003 597 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms