RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 MS4A13Q5J8X5 152 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 VITQ6UXI7 678 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 CHST9Q7L1S5 443 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 SUGP1Q8IWZ8 645 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 CSGALNACT1Q8TDX6 532 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 HSPH1Q92598 858 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 HES6Q96HZ4 224 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 PBKQ96KB5 322 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 RPGRIP1Q96KN7 1286 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 RPRD1AQ96P16 312 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 XPO6Q96QU8 1125 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 NAPGQ99747 312 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TUBB2BQ9BVA1 445 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 SLC2A11Q9BYW1 496 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 BRD9Q9H8M2 597 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 SPHK2Q9NRA0 654 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 MARK1Q9P0L2 795 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 RNF14Q9UBS8 474 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TFR2Q9UP52 801 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 RAD54BQ9Y620 910 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 PRUNE2Q8WUY3 3088 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 IGLV3-10A0A075B6K4 115 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 LRRD1A4D1F6 860 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 E9PAM4 449 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 EEF2KO00418 725 aaKnown RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 HOXC11O43248 304 aaPredicted RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 FTCDO95954 541 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 KRT1P04264 644 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 PRLRP16471 622 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 RHOQP17081 205 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 KDELR1P24390 212 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 EPHB2P29323 1055 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 HOXC13P31276 330 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CASQ1P31415 396 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 PTPN7P35236 360 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 GJC1P36383 396 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 MAPKAPK2P49137 400 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CDH4P55283 916 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 AUHQ13825 339 aaKnown RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 ITPRIPL2Q3MIP1 535 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 C5orf22Q49AR2 442 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 TFDP3Q5H9I0 405 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 TANGO2Q6ICL3 276 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 ZNF783Q6ZMS7 281 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 LRRC49Q8IUZ0 686 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CCDC50Q8IVM0 306 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 BBS7Q8IWZ6 715 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CCDC185Q8N715 623 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CCDC26Q8TAB7 109 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 TMA16Q96EY4 203 aaKnown RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 ASB2Q96Q27 587 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 FERMT1Q9BQL6 677 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CALN1Q9BXU9 219 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 FRMD8P1Q9BZ68 369 aaPredicted RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 SIK2Q9H0K1 926 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 C8orf33Q9H7E9 229 aaPredicted RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 CCL26Q9Y258 94 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 FARP1Q9Y4F1 1045 aaPredicted RBP10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 HYOU1Q9Y4L1 999 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 HS3ST4Q9Y661 456 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 NUMBLQ9Y6R0 609 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 EYSQ5T1H1 3165 aa10.08□□□□□ -0.8
SMARCD1-206ENST00000549274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 CXorf51AA0A1B0GTR3 108 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 DRGXA6NNA5 263 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 WASH4PA8MWX3 477 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 NCAM2O15394 837 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 CREB3O43889 395 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 GREM1O60565 184 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 TJP3O95049 919 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 KLKB1P03952 638 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ADH5P11766 374 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SRFP11831 508 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 TNNT1P13805 278 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 IL1R2P27930 398 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 GDI1P31150 447 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 VIPR2P41587 438 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ATXN1P54253 815 aaKnown RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 TAS2R40P59535 323 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ZP2Q05996 745 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SEMA3BQ13214 749 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 ZNF177Q13360 481 aaPredicted RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 TDGQ13569 410 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 SMTNL2Q2TAL5 461 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 EML3Q32P44 896 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 PPP6R3Q5H9R7 873 aaPredicted RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 PIK3R6Q5UE93 754 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 MANEALQ5VSG8 457 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 RAP1GAP2Q684P5 730 aa10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 RWDD4Q6NW29 188 aaKnown RBP10.07□□□□□ -0.8
SMARCD1-206ENST00000549274 PARM1Q6UWI2 310 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms