RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 PTPRNQ16849 979 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 ZC3H12AQ5D1E8 599 aaKnown RBP20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 MPP7Q5T2T1 576 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 SYCP2LQ5T4T6 812 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 RABEPKQ7Z6M1 372 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 KIAA0907Q7Z7F0 614 aaPredicted RBP20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 TMEM110Q86TL2 294 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 CARNMT1Q8N4J0 409 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 DEFB124Q8NES8 71 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 SHC3Q92529 594 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 FOXJ1Q92949 421 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 SLC39A13Q96H72 371 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 DDX50Q9BQ39 737 aaKnown RBP20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 TMEM245Q9H330 911 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 POPDC2Q9HBU9 364 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 SIX2Q9NPC8 291 aa20.29■□□□□ 0.84
SLC48A1-207ENST00000549243 TYW5A2RUC4 315 aaKnown RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 GTPBP10A4D1E9 387 aaKnown RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 TRUB2O95900 331 aaKnown RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 APOEP02649 317 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 ATP5BP06576 529 aaKnown RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 DLDP09622 509 aaKnown RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 PNMA6AP0CW24 399 aaPredicted RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 PMLP29590 882 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 YWHAZP63104 245 aaKnown RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 ZNF252P-AS1Q0IIN9 211 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 NNTQ13423 1086 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 CAMK2GQ13555 558 aaPredicted RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 MAN2A1Q16706 1144 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 MS4A13Q5J8X5 152 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 WDR45BQ5MNZ6 344 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 OR2T3Q8NH03 318 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 CPXM1Q96SM3 734 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 TRIM62Q9BVG3 475 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 IRX2Q9BZI1 471 aaPredicted RBP20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 MTG2Q9H4K7 406 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 THAP9Q9H5L6 903 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 DNAJC12Q9UKB3 198 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 ANGPTL2Q9UKU9 493 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 CEP295Q9C0D2 2601 aa20.28■□□□□ 0.84
SLC48A1-207ENST00000549243 NYNRINQ9P2P1 1898 aaKnown RBP20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 SYNJ2BP-COX16A0A087WUM0 186 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 CSRP1P21291 193 aaKnown RBP20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 CDH18Q13634 790 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 PLEKHG6Q3KR16 790 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 DCAF6Q58WW2 860 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 RAP1GAP2Q684P5 730 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 MMS22LQ6ZRQ5 1243 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 BEND5Q7L4P6 421 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 FAM114A1Q8IWE2 563 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 LGI2Q8N0V4 545 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 WDTC1Q8N5D0 677 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 MINDY1Q8N5J2 469 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 FIBINQ8TAL6 211 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 MIR1-1HGQ9H1L0 117 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 NUP62CLQ9H1M0 184 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 LHX5Q9H2C1 402 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 COX16Q9P0S2 106 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 KNL1Q8NG31 2342 aa20.27■□□□□ 0.84
SLC48A1-207ENST00000549243 ARHGAP33O14559 1287 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 GRAP2O75791 330 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 OXTRP30559 389 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 CSKP41240 450 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 PTK2Q05397 1052 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 FSCBQ5H9T9 825 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 DCAF12L1Q5VU92 463 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 CHSY1Q86X52 802 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 CCDC117Q8IWD4 279 aaPredicted RBP20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 HDDC3Q8N4P3 179 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 ZCCHC9Q8N567 271 aaKnown RBP20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 C1orf131Q8NDD1 294 aaKnown RBP20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 PPP1R13BQ96KQ4 1090 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 LMLNQ96KR4 655 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 NUP58Q9BVL2 599 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 NDST4Q9H3R1 872 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 FAM204AQ9H8W3 233 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 PRSS16Q9NQE7 514 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 SUSD2Q9UGT4 822 aa20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 INTS6Q9UL03 887 aaKnown RBP20.26■□□□□ 0.83
SLC48A1-207ENST00000549243 FOXN3O00409 490 aaPredicted RBP20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 PES1O00541 588 aaKnown RBP20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 CEACAM1P13688 526 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 GNSP15586 552 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 TACR2P21452 398 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 CLCN1P35523 988 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 NUMBP49757 651 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 VWA3BQ502W6 1294 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 OR6B2Q6IFH4 312 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 SLC47A2Q86VL8 602 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 DEFB106AQ8N104 65 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 ZNF557Q8N988 423 aaPredicted RBP20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 TUBGCP2Q9BSJ2 902 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 PLCB1Q9NQ66 1216 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 PCDHGC3Q9UN70 934 aa20.25■□□□□ 0.83
SLC48A1-207ENST00000549243 FAM170AA1A519 330 aa20.24■□□□□ 0.83
SLC48A1-207ENST00000549243 H0Y626 953 aa20.24■□□□□ 0.83
SLC48A1-207ENST00000549243 OPHN1O60890 802 aa20.24■□□□□ 0.83
SLC48A1-207ENST00000549243 LUC7L3O95232 432 aaKnown RBP20.24■□□□□ 0.83
SLC48A1-207ENST00000549243 IGLV3-19P01714 112 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms