RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 COPG2Q9UBF2 871 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 APPL1Q9UKG1 709 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 PPP2R3BQ9Y5P8 575 aa14.11□□□□□ -0.15
HDAC7-228ENST00000548938 TTC36A6NLP5 189 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 DENRO43583 198 aaKnown RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 FBXO21O94952 628 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CRTAMO95727 393 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 RALBP11234 206 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 GRK2P25098 689 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 KLF10Q13118 480 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 PDK2Q15119 407 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CCDC14Q49A88 953 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 OLFML2BQ68BL8 750 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 PAOXQ6QHF9 649 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 TMEM192Q8IY95 271 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 ATP2A3Q93084 1043 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 RBM38Q9H0Z9 239 aaKnown RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 RNF181Q9P0P0 153 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 DOCK1Q14185 1865 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 FAM200BP0CF97 657 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CXCL8P10145 99 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CYP3A5P20815 502 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 TCF7P36402 384 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 HARS2P49590 506 aaKnown RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 FSTL1Q12841 308 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 SLC10A2Q12908 348 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 SLC9B1Q4ZJI4 515 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CDKL3Q8IVW4 592 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 AGR3Q8TD06 166 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 TMEM176AQ96HP8 235 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CLMNQ96JQ2 1002 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CNBD2Q96M20 576 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 FAM210AQ96ND0 272 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 SYT17Q9BSW7 474 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 FAM96AQ9H5X1 160 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 COG4Q9H9E3 785 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 SSX2IPQ9Y2D8 614 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 AP4B1Q9Y6B7 739 aa14.1□□□□□ -0.15
HDAC7-228ENST00000548938 DICER1Q9UPY3 1922 aaKnown RBP14.1□□□□□ -0.15
HDAC7-228ENST00000548938 CILPO75339 1184 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 RGS7P49802 495 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 MRPS22P82650 360 aaKnown RBP14.09□□□□□ -0.15
HDAC7-228ENST00000548938 MYBPC1Q00872 1141 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 SURF1Q15526 300 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 TARBP2Q15633 366 aaKnown RBP14.09□□□□□ -0.15
HDAC7-228ENST00000548938 MYLK3Q32MK0 819 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 STEAP4Q687X5 459 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF781Q8N8C0 355 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 C1orf127Q8N9H9 656 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 MAPK15Q8TD08 544 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 PCYT2Q99447 389 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 DCDC2Q9UHG0 476 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 SBF1O95248 1867 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 AIM2O14862 343 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 GCATO75600 419 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 NFICP08651 508 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 YBX3P16989 372 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■□□□□ 10.3
HDAC7-228ENST00000548938 NUDT2P50583 147 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 SCNN1BP51168 640 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 EFNA5P52803 228 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 HPCAP84074 193 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 STILQ15468 1287 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 TNS4Q8IZW8 715 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 RNF149Q8NC42 400 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 ZFP28Q8NHY6 868 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 C12orf42Q96LP6 360 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
HDAC7-228ENST00000548938 LENG8Q96PV6 779 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-228ENST00000548938 RTKNQ9BST9 563 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 MGAMO43451 1857 aa14.09□□□□□ -0.15
HDAC7-228ENST00000548938 B4GALT5O43286 388 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 B4GALT4O60513 344 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.15
HDAC7-228ENST00000548938 ALDH1A2O94788 518 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 SRGAP2BP0DMP2 458 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 ACAT1P24752 427 aaKnown RBP14.08□□□□□ -0.15
HDAC7-228ENST00000548938 CYP2F1P24903 491 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 MSX2P35548 267 aaPredicted RBP14.08□□□□□ -0.15
HDAC7-228ENST00000548938 SERPINB5P36952 375 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 SESN2P58004 480 aaPredicted RBP14.08□□□□□ -0.15
HDAC7-228ENST00000548938 BOLA3Q53S33 107 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 PPM1LQ5SGD2 360 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 EEF1DP3Q658K8 133 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 CMC1Q7Z7K0 106 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 OR52B2Q96RD2 323 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 MAGEB5Q9BZ81 275 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 STK39Q9UEW8 545 aa14.08□□□□□ -0.15
HDAC7-228ENST00000548938 ZNF214Q9UL59 606 aaPredicted RBP14.08□□□□□ -0.15
HDAC7-228ENST00000548938 POLR2AP24928 1970 aaKnown RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 C19orf81C9J6K1 198 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 ITGB3P05106 788 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 F7P08709 466 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 PRDX6P30041 224 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 THOP1P52888 689 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 SEMA5AQ13591 1074 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms