RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 TYW5A2RUC4 315 aaKnown RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 E9PAM4 449 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 NRG2O14511 850 aaPredicted RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 ZNF185O15231 689 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 LRIG2O94898 1065 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 KLKB1P03952 638 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 CD48P09326 243 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 GOT1P17174 413 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 TACR2P21452 398 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 EPHB2P29323 1055 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 USP4Q13107 963 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 AUHQ13825 339 aaKnown RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 MANEALQ5VSG8 457 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 TTC39BQ5VTQ0 682 aaPredicted RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 KAZNQ674X7 775 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 BBS12Q6ZW61 710 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 BZW1Q7L1Q6 419 aaKnown RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 OTOP3Q7RTS5 596 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 CEP112Q8N8E3 955 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 SUSD6Q92537 303 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 RPGRIP1Q96KN7 1286 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 ZSWIM3Q96MP5 696 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 ASB16Q96NS5 453 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 GUCD1Q96NT3 240 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 PRMT1Q99873 361 aaKnown RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 L2HGDHQ9H9P8 463 aa16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 XPO7Q9UIA9 1087 aaKnown RBP16.35■□□□□ 0.21
TRAFD1-203ENST00000547063 IGLV3-10A0A075B6K4 115 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 APOL1O14791 398 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 TGM2P21980 687 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 IL4RP24394 825 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 HOXC13P31276 330 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 GBP2P32456 591 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 SERPINB6P35237 376 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 SMAD4Q13485 552 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 CCDC85BQ15834 202 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 ZNF77Q15935 545 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 RAP1GAP2Q684P5 730 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 NADSYN1Q6IA69 706 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 RWDD4Q6NW29 188 aaKnown RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 FAM217AQ8IXS0 508 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 CPXM2Q8N436 756 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 HLA-CQ95604 372 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 HEMGNQ9BXL5 484 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 FRMD8P1Q9BZ68 369 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 ZYG11BQ9C0D3 744 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 ZFP14Q9HCL3 533 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 ARHGEF4Q9NR80 690 aa16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 USP15Q9Y4E8 981 aaPredicted RBP16.34■□□□□ 0.21
TRAFD1-203ENST00000547063 DENND4AQ7Z401 1863 aa16.33■□□□□ 0.21
TRAFD1-203ENST00000547063 DRGXA6NNA5 263 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM72CH0Y354 149 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 CCDC188H7C350 402 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 APOC4-APOC2K7ER74 178 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 GREM1O60565 184 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 CST8O60676 142 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 PRAMEF12O95522 483 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 APOC2P02655 101 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 KRT10P13645 584 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 RHOQP17081 205 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 KCNA5P22460 613 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 NR2C2P49116 596 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 ZXDBP98169 803 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 DPYSQ14117 519 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 C5orf22Q49AR2 442 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM133BQ5BKY9 247 aaKnown RBP16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM78AQ5JUQ0 283 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM72AQ5TYM5 149 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 SLC9A4Q6AI14 798 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM72DQ6L9T8 149 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FBXL22Q6P050 247 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 AADACL2Q6P093 401 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 TMCO3Q6UWJ1 677 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM72BQ86X60 149 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 LGI2Q8N0V4 545 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 LZTR1Q8N653 840 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 TTC16Q8NEE8 873 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 PCDH19Q8TAB3 1148 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 MS4A14Q96JA4 679 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 SMG9Q9H0W8 520 aaKnown RBP16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 POMKQ9H5K3 350 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 RRAGDQ9NQL2 400 aaPredicted RBP16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 THG1LQ9NWX6 298 aaKnown RBP16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 VANGL2Q9ULK5 521 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 CCL26Q9Y258 94 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 RAD54BQ9Y620 910 aa16.33■□□□□ 0.2
TRAFD1-203ENST00000547063 WASH4PA8MWX3 477 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 KRIT1O00522 736 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 CYBBP04839 570 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 LAMP2P13473 410 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 ERCC2P18074 760 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 MTSS1LQ765P7 747 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms