RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DRGXA6NNA5 263 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 F5H5T6 163 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 I6L893 689 aaPredicted RBP14.97□□□□□ -0.01
DDX54-203ENST00000546869 CCP110O43303 1012 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 TIMM44O43615 452 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 TSPAN3O60637 253 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 PAPSS2O95340 614 aaPredicted RBP14.97□□□□□ -0.01
DDX54-203ENST00000546869 LCA5LO95447 670 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 H2AFZP0C0S5 128 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 TMEM253P0C7T8 217 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 ATXN1P54253 815 aaKnown RBP14.97□□□□□ -0.01
DDX54-203ENST00000546869 MRPS21P82921 87 aaKnown RBP14.97□□□□□ -0.01
DDX54-203ENST00000546869 OGDHQ02218 1023 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 SCAPQ12770 1279 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 AUHQ13825 339 aaKnown RBP14.97□□□□□ -0.01
DDX54-203ENST00000546869 E2F5Q15329 346 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 RABGAP1LQ5R372 815 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 SH3PXD2AQ5TCZ1 1133 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 RAP1GAP2Q684P5 730 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 FBXL22Q6P050 247 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 H2AFVQ71UI9 128 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 CHSY1Q86X52 802 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 DNAAF5Q86Y56 855 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 TMTC1Q8IUR5 882 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 FIBINQ8TAL6 211 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 PRICKLE1Q96MT3 831 aaPredicted RBP14.97□□□□□ -0.01
DDX54-203ENST00000546869 ANLNQ9NQW6 1124 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 PLK2Q9NYY3 685 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 LCMT1Q9UIC8 334 aa14.97□□□□□ -0.01
DDX54-203ENST00000546869 ZDBF2Q9HCK1 2354 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 IGLV3-10A0A075B6K4 115 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 TBC1D3BA6NDS4 549 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 ATMINO43313 823 aaPredicted RBP14.96□□□□□ -0.01
DDX54-203ENST00000546869 GALR2O43603 387 aaPredicted RBP14.96□□□□□ -0.01
DDX54-203ENST00000546869 TBL1XO60907 577 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 CHRM1P11229 460 aaPredicted RBP14.96□□□□□ -0.01
DDX54-203ENST00000546869 KIR2DL1P43626 348 aaPredicted RBP14.96□□□□□ -0.01
DDX54-203ENST00000546869 SGSHP51688 502 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 MESP2Q0VG99 397 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 TCEAL1Q15170 157 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 FAM131BQ86XD5 332 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 C1orf210Q8IVY1 113 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 ZNF683Q8IZ20 524 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 LGI2Q8N0V4 545 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 USP33Q8TEY7 942 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 RBM12Q9NTZ6 932 aaKnown RBP14.96□□□□□ -0.01
DDX54-203ENST00000546869 UVRAGQ9P2Y5 699 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 MYO1AQ9UBC5 1043 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 CLEC4EQ9ULY5 219 aa14.96□□□□□ -0.01
DDX54-203ENST00000546869 ARIH1Q9Y4X5 557 aaPredicted RBP14.96□□□□□ -0.01
DDX54-203ENST00000546869 NPC1O15118 1278 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 CLDN11O75508 207 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 RNF8O76064 485 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 HNRNPLP14866 589 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX54-203ENST00000546869 PSMA2P25787 234 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 PCK1P35558 622 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 OXCT1P55809 520 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 RPS24P62847 133 aaKnown RBP14.95□□□□□ -0.02
DDX54-203ENST00000546869 ZNF252P-AS1Q0IIN9 211 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 MTAPQ13126 283 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 GAS6Q14393 721 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 PIGHQ14442 188 aaPredicted RBP14.95□□□□□ -0.02
DDX54-203ENST00000546869 EIF4HQ15056 248 aaKnown RBP14.95□□□□□ -0.02
DDX54-203ENST00000546869 CDO1Q16878 200 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 RAB6CQ53S08 254 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 ARTNQ5T4W7 220 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 LRRC31Q6UY01 552 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 CHST9Q7L1S5 443 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 SLFN11Q7Z7L1 901 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 NIPA2Q8N8Q9 360 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 WFIKKN2Q8TEU8 576 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 CTNNBL1Q8WYA6 563 aaPredicted RBP14.95□□□□□ -0.02
DDX54-203ENST00000546869 BHMTQ93088 406 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 MYEOVQ96EZ4 313 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 LMLNQ96KR4 655 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 NUP85Q9BW27 656 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 RAB6CQ9H0N0 254 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 PPARGC1AQ9UBK2 798 aaKnown RBP14.95□□□□□ -0.02
DDX54-203ENST00000546869 FBXO4Q9UKT5 387 aa14.95□□□□□ -0.02
DDX54-203ENST00000546869 A0A1B0GVM2 712 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 TCAF2A6NFQ2 919 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 GOLGA6L6A8MZA4 724 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 EIF3CLB5ME19 914 aaKnown RBP14.94□□□□□ -0.02
DDX54-203ENST00000546869 PRRT4C9JH25 899 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 TRIM24O15164 1050 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 RNF40O75150 1001 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 LUC7L3O95232 432 aaKnown RBP14.94□□□□□ -0.02
DDX54-203ENST00000546869 HLA-FP30511 346 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 HOXA6P31267 233 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 CYLC1P35663 651 aaPredicted RBP14.94□□□□□ -0.02
DDX54-203ENST00000546869 CCR3P51677 355 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 CDH4P55283 916 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 KDSRQ06136 332 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 DMC1Q14565 340 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 ZNF528Q3MIS6 628 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 SYT13Q7L8C5 426 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 TRMT11Q7Z4G4 463 aaKnown RBP14.94□□□□□ -0.02
DDX54-203ENST00000546869 ANKS1BQ7Z6G8 1248 aa14.94□□□□□ -0.02
DDX54-203ENST00000546869 C14orf80Q86SX3 495 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms