RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BGNP21810 368 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 MIPP30301 263 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 GARSP41250 739 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ATP5OP48047 213 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 HSPA13P48723 471 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CACNA2D1P54289 1103 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF280AP59817 542 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 YWHAZP63104 245 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 PTPN11Q06124 597 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ADCY1Q08828 1119 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 INCA1Q0VD86 236 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SF3A3Q12874 501 aaKnown RBP eCLIP6.67□□□□□ -1.346e-19■■■□□ 14.9
SNHG1-225ENST00000545920 ILF2Q12905 390 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SEMA5AQ13591 1074 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 THOC5Q13769 683 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 LLGL1Q15334 1064 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TAF1CQ15572 869 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ZYXQ15942 572 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CCDC153Q494R4 210 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ATP13A4Q4VNC1 1196 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 HSP90AA5PQ58FG0 334 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SH2D4BQ5SQS7 431 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ZFP1Q6P2D0 407 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 LCLAT1Q6UWP7 414 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 DPH6Q7L8W6 267 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 PLPPR4Q7Z2D5 763 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ZC3H18Q86VM9 953 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 UNC45BQ8IWX7 931 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 NIM1KQ8IY84 436 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ULK2Q8IYT8 1036 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 KIRREL3Q8IZU9 778 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 WDTC1Q8N5D0 677 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 FAM71DQ8N9W8 422 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 PIWIL2Q8TC59 973 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ACTRT2Q8TDY3 377 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 GFM2Q969S9 779 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ISL2Q96A47 359 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 AZIN2Q96A70 460 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM176AQ96HP8 235 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 MAML3Q96JK9 1138 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SERAC1Q96JX3 654 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 HSH2DQ96JZ2 352 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TSPAN18Q96SJ8 248 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 KCNK16Q96T55 309 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SERPINI1Q99574 410 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ECSITQ9BQ95 431 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SYT15Q9BQS2 421 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 ADPGKQ9BRR6 497 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 WDR83Q9BRX9 315 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 FAM167BQ9BTA0 163 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CCDC106Q9BWC9 280 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 YIPF3Q9GZM5 350 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 NMUR2Q9GZQ4 415 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM39BQ9GZU3 492 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 USP29Q9HBJ7 922 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 POPDC2Q9HBU9 364 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 MRPL40Q9NQ50 206 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 C6orf203Q9P0P8 240 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 PPARGC1AQ9UBK2 798 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 FAM8A1Q9UBU6 413 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 MORF4L1Q9UBU8 362 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 DNMT3LQ9UJW3 386 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 PRPF19Q9UMS4 504 aaKnown RBP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CHMP2BQ9UQN3 213 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TNFSF13BQ9Y275 285 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 TBC1D30Q9Y2I9 924 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 PCDHA11Q9Y5I1 949 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 RAD54BQ9Y620 910 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CDY2AQ9Y6F7 541 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 CDY1Q9Y6F8 540 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SCN9AQ15858 1988 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 SF3B1O75533 1304 aaKnown RBP eCLIP6.67□□□□□ -1.344e-7■■■□□ 15.2
SNHG1-225ENST00000545920 PTPRJQ12913 1337 aa6.67□□□□□ -1.34
SNHG1-225ENST00000545920 DYTNA2CJ06 578 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 C2CD4BA6NLJ0 364 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 FOXO6A8MYZ6 492 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM114B3SHH9 223 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 BTBD19C9JJ37 291 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 SLCO1B7G3V0H7 640 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 H0Y3Z8 333 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 H0YJX3 145 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 CILPO75339 1184 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 RFPL1O75677 317 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PENKP01210 267 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 IGHA1P01876 353 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PRKCBP05771 671 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 LYNP07948 512 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 HOXC6P09630 235 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PABPC4LP0CB38 370 aaKnown RBP6.66□□□□□ -1.34
SNHG1-225ENST00000545920 MCF2P10911 925 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 GNAT1P11488 350 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 MX2P20592 715 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 EDNRBP24530 442 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 IL1R2P27930 398 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 IRS1P35568 1242 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 PTPN9P43378 593 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 POLD2P49005 469 aa6.66□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF135P52742 658 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms