RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MAN2A1Q16706 1144 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 MS4A13Q5J8X5 152 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 PASD1Q8IV76 773 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 OR2T3Q8NH03 318 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 PRCCQ92733 491 aaPredicted RBP21.92■■□□□ 1.1
SCARB1-210ENST00000545493 CPXM1Q96SM3 734 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 THAP9Q9H5L6 903 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 POPDC2Q9HBU9 364 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 STIM2Q9P246 746 aa21.92■■□□□ 1.1
SCARB1-210ENST00000545493 KMT2BQ9UMN6 2715 aaPredicted RBP21.91■■□□□ 1.1
SCARB1-210ENST00000545493 C7P10643 843 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 CSRP1P21291 193 aaKnown RBP21.91■■□□□ 1.1
SCARB1-210ENST00000545493 ZNF252P-AS1Q0IIN9 211 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 DPY19L2P1Q6NXN4 242 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 RABEPKQ7Z6M1 372 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 WDTC1Q8N5D0 677 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 C1orf131Q8NDD1 294 aaKnown RBP21.91■■□□□ 1.1
SCARB1-210ENST00000545493 MYO19Q96H55 970 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 TRIM62Q9BVG3 475 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 GPR174Q9BXC1 333 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 PCDHGC3Q9UN70 934 aa21.91■■□□□ 1.1
SCARB1-210ENST00000545493 CACNA1EQ15878 2313 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 CAPN9O14815 690 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 TRUB2O95900 331 aaKnown RBP21.9■■□□□ 1.1
SCARB1-210ENST00000545493 DLDP09622 509 aaKnown RBP21.9■■□□□ 1.1
SCARB1-210ENST00000545493 EIF4EBP2Q13542 120 aaPredicted RBP21.9■■□□□ 1.1
SCARB1-210ENST00000545493 MIIPQ5JXC2 388 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 RGL4Q8IZJ4 473 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 DEFB124Q8NES8 71 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 OR2I1PQ8NGU4 316 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 FOXJ1Q92949 421 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 SLC2A13Q96QE2 648 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 GTPBP2Q9BX10 602 aaKnown RBP21.9■■□□□ 1.1
SCARB1-210ENST00000545493 NUP62CLQ9H1M0 184 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 ANGPTL2Q9UKU9 493 aa21.9■■□□□ 1.1
SCARB1-210ENST00000545493 INTS6Q9UL03 887 aaKnown RBP21.9■■□□□ 1.1
SCARB1-210ENST00000545493 MAP1BP46821 2468 aaKnown RBP21.89■■□□□ 1.1
SCARB1-210ENST00000545493 CEP295Q9C0D2 2601 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 TYW5A2RUC4 315 aaKnown RBP21.89■■□□□ 1.09
SCARB1-210ENST00000545493 MEI4A8MW99 385 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 APOEP02649 317 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 MAOBP27338 520 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 GFPT1Q06210 699 aaPredicted RBP21.89■■□□□ 1.09
SCARB1-210ENST00000545493 TPD52L1Q16890 204 aaPredicted RBP21.89■■□□□ 1.09
SCARB1-210ENST00000545493 HSP90AA4PQ58FG1 418 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 DCAF6Q58WW2 860 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 ZC3H12AQ5D1E8 599 aaKnown RBP21.89■■□□□ 1.09
SCARB1-210ENST00000545493 FSCBQ5H9T9 825 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 RAP1GAP2Q684P5 730 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 MMS22LQ6ZRQ5 1243 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 FAM183BPQ6ZVS7 135 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 CFAP52Q8N1V2 620 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 CARNMT1Q8N4J0 409 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 MINDY1Q8N5J2 469 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 ZNF557Q8N988 423 aaPredicted RBP21.89■■□□□ 1.09
SCARB1-210ENST00000545493 FIBINQ8TAL6 211 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 DDX50Q9BQ39 737 aaKnown RBP21.89■■□□□ 1.09
SCARB1-210ENST00000545493 LHX5Q9H2C1 402 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 DNAJC12Q9UKB3 198 aa21.89■■□□□ 1.09
SCARB1-210ENST00000545493 NUMA1Q14980 2115 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 ARHGAP33O14559 1287 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 LUC7L3O95232 432 aaKnown RBP21.88■■□□□ 1.09
SCARB1-210ENST00000545493 ACADMP11310 421 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 POLR2EP19388 210 aaKnown RBP21.88■■□□□ 1.09
SCARB1-210ENST00000545493 OXTRP30559 389 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 CSKP41240 450 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 YWHAZP63104 245 aaKnown RBP21.88■■□□□ 1.09
SCARB1-210ENST00000545493 SHC2P98077 582 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 CDH18Q13634 790 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 PTPN20Q4JDL3 420 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 WDR45BQ5MNZ6 344 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 SYCP2LQ5T4T6 812 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 DCAF12L1Q5VU92 463 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 SLC47A2Q86VL8 602 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 CHSY1Q86X52 802 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 FAM114A1Q8IWE2 563 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 ZCCHC9Q8N567 271 aaKnown RBP21.88■■□□□ 1.09
SCARB1-210ENST00000545493 DNASE2BQ8WZ79 361 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 TTC17Q96AE7 1141 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 PPP1R13BQ96KQ4 1090 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 MRGPRX3Q96LB0 322 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 NDST4Q9H3R1 872 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 MTG2Q9H4K7 406 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 FAM204AQ9H8W3 233 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 PRSS16Q9NQE7 514 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 ASNSD1Q9NWL6 643 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 SUSD2Q9UGT4 822 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 PLA2G4CQ9UP65 541 aa21.88■■□□□ 1.09
SCARB1-210ENST00000545493 ERBB2P04626 1255 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 ATP5BP06576 529 aaKnown RBP21.87■■□□□ 1.09
SCARB1-210ENST00000545493 CEACAM1P13688 526 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 PRKCSHP14314 528 aaPredicted RBP21.87■■□□□ 1.09
SCARB1-210ENST00000545493 TACR2P21452 398 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 CLCN1P35523 988 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 ATXN3P54252 364 aaPredicted RBP21.87■■□□□ 1.09
SCARB1-210ENST00000545493 SEMA3BQ13214 749 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 PLEKHG6Q3KR16 790 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 VWA3BQ502W6 1294 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 OLFML1Q6UWY5 402 aa21.87■■□□□ 1.09
SCARB1-210ENST00000545493 PIP4P1Q86T03 277 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms