RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 DENND2CQ68D51 928 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 PDE12Q6L8Q7 609 aaKnown RBP7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 KLHDC10Q6PID8 442 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 VSIG1Q86XK7 387 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 RCOR2Q8IZ40 523 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 PLD5Q8N7P1 536 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 PCDH19Q8TAB3 1148 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 RIN3Q8TB24 985 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 MYEOVQ96EZ4 313 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 PGM2Q96G03 612 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 OSBPL8Q9BZF1 889 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 TTYH1Q9H313 450 aaPredicted RBP7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 ZDHHC18Q9NUE0 388 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 HCFC1R1Q9NWW0 138 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 MSRAQ9UJ68 235 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 MAGED2Q9UNF1 606 aaPredicted RBP7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 AP4E1Q9UPM8 1137 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 MFHAS1Q9Y4C4 1052 aa7.25□□□□□ -1.25
HMGCS2-204ENST00000544913 C2orf16Q68DN1 1984 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ATXN2Q99700 1313 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 SYNJ2BP-COX16A0A087WUM0 186 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ZNF487B1APH4 448 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 CCL16O15467 120 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 KLKB1P03952 638 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 HOXC13P31276 330 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 MDH1P40925 334 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 SSR1P43307 286 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ALDH1A3P47895 512 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 PSEN1P49768 467 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 EPHB3P54753 998 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ZNF844Q08AG5 666 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 PPP2R5DQ14738 602 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 PPP1R7Q15435 360 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ERMARDQ5T6L9 678 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 PIK3R6Q5UE93 754 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 SLC9A4Q6AI14 798 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 SCYL2Q6P3W7 929 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 DRICH1Q6PGQ1 229 aaPredicted RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 BBS12Q6ZW61 710 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ADAT2Q7Z6V5 191 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 DDX42Q86XP3 938 aaKnown RBP eCLIP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 PSTKQ8IV42 348 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ARHGAP18Q8N392 663 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 CCDC89Q8N998 374 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 SHKBP1Q8TBC3 707 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 BCAS4Q8TDM0 211 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ATG4AQ8WYN0 398 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 HSPH1Q92598 858 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ART4Q93070 314 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 CENPTQ96BT3 561 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 MRPL38Q96DV4 380 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 TCEAL4Q96EI5 215 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 RBM41Q96IZ5 413 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 CSPG4P5Q96PW8 444 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 TRIM62Q9BVG3 475 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 HEMGNQ9BXL5 484 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 FRMD8P1Q9BZ68 369 aaPredicted RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 LMAN2LQ9H0V9 348 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 EPN3Q9H201 632 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 DPH5Q9H2P9 285 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 SLC28A3Q9HAS3 691 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 TLR8Q9NR97 1041 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ETNK2Q9NVF9 386 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 DDX56Q9NY93 547 aaKnown RBP7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 COX16Q9P0S2 106 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 TLR6Q9Y2C9 796 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 EFR3BQ9Y2G0 817 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 ASB3Q9Y575 518 aa7.24□□□□□ -1.25
HMGCS2-204ENST00000544913 GFRA2O00451 464 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SOX1O00570 391 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CAPN9O14815 690 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 F9P00740 461 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PECAM1P16284 738 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ELF1P32519 619 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NRIP1P48552 1158 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 KCNQ1P51787 676 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PLTPP55058 493 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CDH6P55285 790 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PPP2R2AP63151 447 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NTHL1P78549 312 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CYP4F8P98187 520 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 HYAL1Q12794 435 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 EFEMP1Q12805 493 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TRADDQ15628 312 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TRIP4Q15650 581 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 UAP1Q16222 522 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 HADHQ16836 314 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 LRIT3Q3SXY7 679 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TFDP3Q5H9I0 405 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PRSS36Q5K4E3 855 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 NADSYN1Q6IA69 706 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 CCDC149Q6ZUS6 474 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RTL10Q7L3V2 364 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 RBM23Q86U06 439 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 TP53INP2Q8IXH6 220 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 ZNF512Q96ME7 567 aaPredicted RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 SERPINB11Q96P15 392 aa7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 PRMT1Q99873 361 aaKnown RBP7.23□□□□□ -1.25
HMGCS2-204ENST00000544913 FAM118BQ9BPY3 351 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms