RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ZNF776Q68DI1 518 aaPredicted RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 LRRC69Q6ZNQ3 347 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 ADAT2Q7Z6V5 191 aaKnown RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 CACTIN-AS1Q8N1I8 211 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 ARHGAP18Q8N392 663 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 TAS1R2Q8TE23 839 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 GOLGA1Q92805 767 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 LMLNQ96KR4 655 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 ACE2Q9BYF1 805 aaPredicted RBP13.38□□□□□ -0.27
USP28-212ENST00000544750 NIF3L1Q9GZT8 377 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 MTG2Q9H4K7 406 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 ABCB8Q9NUT2 735 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 SERGEFQ9UGK8 458 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 STRIP2Q9ULQ0 834 aa13.38□□□□□ -0.27
USP28-212ENST00000544750 TEX51A0A1B0GUA7 166 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 CYSRT1A8MQ03 144 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 WNT9AO14904 365 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 MAPK13O15264 365 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 KIF20AO95235 890 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 LATS1O95835 1130 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 NR3C1P04150 777 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 CD58P19256 250 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 GALCP54803 685 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 MCCD1P59942 119 aaPredicted RBP13.37□□□□□ -0.27
USP28-212ENST00000544750 PPP3CAQ08209 521 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 RESP18Q5W5W9 173 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 KANSL1Q7Z3B3 1105 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 SLC4A11Q8NBS3 891 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 RFFLQ8WZ73 363 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 TMA16Q96EY4 203 aaKnown RBP13.37□□□□□ -0.27
USP28-212ENST00000544750 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
USP28-212ENST00000544750 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 ADAMTS1Q9UHI8 967 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 SCML1Q9UN30 329 aa13.37□□□□□ -0.27
USP28-212ENST00000544750 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
USP28-212ENST00000544750 RRP8O43159 456 aaKnown RBP13.36□□□□□ -0.27
USP28-212ENST00000544750 ZBED1O96006 694 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 ITGAVP06756 1048 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 CD38P28907 300 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 EPHA8P29322 1005 aaPredicted RBP13.36□□□□□ -0.27
USP28-212ENST00000544750 CD70P32970 193 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 AFMP43652 599 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 ME1P48163 572 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 TKTL1P51854 596 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 C21orf59P57076 290 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 TLE3Q04726 772 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 ZNF394Q53GI3 561 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 ADGRF1Q5T601 910 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 RSRC2Q7L4I2 434 aaKnown RBP13.36□□□□□ -0.27
USP28-212ENST00000544750 GPR155Q7Z3F1 870 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 NDRG1Q92597 394 aaKnown RBP13.36□□□□□ -0.27
USP28-212ENST00000544750 FGF11Q92914 225 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 ULBP1Q9BZM6 244 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 IMPG2Q9BZV3 1241 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 OLA1Q9NTK5 396 aaKnown RBP13.36□□□□□ -0.27
USP28-212ENST00000544750 AK5Q9Y6K8 562 aa13.36□□□□□ -0.27
USP28-212ENST00000544750 COL27A1Q8IZC6 1860 aaPredicted RBP13.36□□□□□ -0.27
USP28-212ENST00000544750 TULP2O00295 520 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 YKT6O15498 198 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 BRINP1O60477 761 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 SIN3BO75182 1162 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
USP28-212ENST00000544750 SLFN14P0C7P3 912 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ABCB4P21439 1286 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 RXRGP48443 463 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 GCLMP48507 274 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 HARS2P49590 506 aaKnown RBP13.35□□□□□ -0.27
USP28-212ENST00000544750 VAMP7P51809 220 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 RAD23BP54727 409 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 KRT85P78386 507 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ENPEPQ07075 957 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 BNIP3Q12983 259 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ILKQ13418 452 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ARID5BQ14865 1188 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 HNRNPA1L2Q32P51 320 aaKnown RBP13.35□□□□□ -0.27
USP28-212ENST00000544750 MPP7Q5T2T1 576 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 PIK3R6Q5UE93 754 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 EID2Q8N6I1 236 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 ANKRD52Q8NB46 1076 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 BAP1Q92560 729 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 FAXDC2Q96IV6 333 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 MRGPRX3Q96LB0 322 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 HEXIM2Q96MH2 286 aaKnown RBP13.35□□□□□ -0.27
USP28-212ENST00000544750 IRX2Q9BZI1 471 aaPredicted RBP13.35□□□□□ -0.27
USP28-212ENST00000544750 NEUROG2Q9H2A3 272 aa13.35□□□□□ -0.27
USP28-212ENST00000544750 FBXL12Q9NXK8 326 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms