RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 SCML2Q9UQR0 700 aa10.41□□□□□ -0.74
MDH1-216ENST00000544381 R3HDM2Q9Y2K5 976 aaKnown RBP10.41□□□□□ -0.74
MDH1-216ENST00000544381 PLXNA4Q9HCM2 1894 aa10.41□□□□□ -0.74
MDH1-216ENST00000544381 ZFHX2Q9C0A1 2572 aaPredicted RBP10.41□□□□□ -0.74
MDH1-216ENST00000544381 ESYT3A0FGR9 886 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 ZSCAN5CA6NGD5 496 aaPredicted RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 TBX10O75333 385 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 RPL17P18621 184 aaKnown RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 YWHAQP27348 245 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 PTGIRP43119 386 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 TUFMP49411 452 aaKnown RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 GPR15P49685 360 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 AIF1P55008 147 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 DYNLT1P63172 113 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 ROR1Q01973 937 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 DSG1Q02413 1049 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 ADCY2Q08462 1091 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 HYAL1Q12794 435 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 DUSP4Q13115 394 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 GPM6BQ13491 265 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 CAMK1Q14012 370 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 DPYSL3Q14195 570 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 HLTFQ14527 1009 aaKnown RBP eCLIP10.4□□□□□ -0.74
MDH1-216ENST00000544381 DPYSL2Q16555 572 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 ARL13BQ3SXY8 428 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 PPP6R3Q5H9R7 873 aaPredicted RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 EFHC2Q5JST6 749 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 SLC8B1Q6J4K2 584 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 DENND5BQ6ZUT9 1274 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 BEND5Q7L4P6 421 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 BHLHA9Q7RTU4 235 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 GSTA5Q7RTV2 222 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 MON1AQ86VX9 555 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 TTC9BQ8N6N2 239 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 CCDC185Q8N715 623 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 EIF1ADQ8N9N8 165 aaKnown RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 RNF139Q8WU17 664 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 CASKIN2Q8WXE0 1202 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 SLCO2A1Q92959 643 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 RNF34Q969K3 372 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 PGAP3Q96FM1 320 aaPredicted RBP10.4□□□□□ -0.74
MDH1-216ENST00000544381 SPATA17Q96L03 361 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 ZNF670Q9BS34 389 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 TRIM51Q9BSJ1 452 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 TRIM31Q9BZY9 425 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 DPH5Q9H2P9 285 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 PCDH18Q9HCL0 1135 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 COMMD8Q9NX08 183 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.4□□□□□ -0.74
MDH1-216ENST00000544381 PRKAG3Q9UGI9 489 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 MUTYHQ9UIF7 546 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 FZD10Q9ULW2 581 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 ZNF148Q9UQR1 794 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 MYO16Q9Y6X6 1858 aa10.4□□□□□ -0.74
MDH1-216ENST00000544381 WDR27A2RRH5 827 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 ZNF487B1APH4 448 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 C5orf67F2Z3F1 127 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 APOL1O14791 398 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 GRM6O15303 877 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 ADAM12O43184 909 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 DAPK3O43293 454 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 MBTPS2O43462 519 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 LIASO43766 372 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 SEC31AO94979 1220 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 ZFXP17010 805 aaPredicted RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 L1CAMP32004 1257 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 ARL4AP40617 200 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 TNNT3P45378 269 aaPredicted RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 CARSP49589 748 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 BYSLQ13895 437 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 SMAD2Q15796 467 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 CA9Q16790 459 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.39□□□□□ -0.752e-7■■□□□ 13.4
MDH1-216ENST00000544381 ANKRD20A8PQ5CZ79 823 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 BEND6Q5SZJ8 279 aaPredicted RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 OTUD1Q5VV17 481 aaPredicted RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 TPGS2Q68CL5 300 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 DRICH1Q6PGQ1 229 aaPredicted RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 BNIPLQ7Z465 357 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 GSPT2Q8IYD1 628 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 VPS52Q8N1B4 723 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 ACTL9Q8TC94 416 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.39□□□□□ -0.75
MDH1-216ENST00000544381 FBXO32Q969P5 355 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 HAUS1Q96CS2 278 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 RNF157Q96PX1 679 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 FAM118BQ9BPY3 351 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 NSUN3Q9H649 340 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 WDCPQ9H6R7 721 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 MRPL17Q9NRX2 175 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 PIGVQ9NUD9 493 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 TMEM51Q9NW97 253 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 CALCOCO1Q9P1Z2 691 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 AFF4Q9UHB7 1163 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 NFU1Q9UMS0 254 aa10.39□□□□□ -0.75
MDH1-216ENST00000544381 DRG1Q9Y295 367 aaKnown RBP10.39□□□□□ -0.75
MDH1-216ENST00000544381 SSX2IPQ9Y2D8 614 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms