RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NUCKS1Q9H1E3 243 aaKnown RBP24.1■■□□□ 1.45
CHFR-222ENST00000544093 HSD3B7Q9H2F3 369 aa24.1■■□□□ 1.45
CHFR-222ENST00000544093 NLRC4Q9NPP4 1024 aa24.1■■□□□ 1.45
CHFR-222ENST00000544093 VPS45Q9NRW7 570 aa24.1■■□□□ 1.45
CHFR-222ENST00000544093 CALCOCO1Q9P1Z2 691 aa24.1■■□□□ 1.45
CHFR-222ENST00000544093 NOCTQ9UK39 431 aaKnown RBP24.1■■□□□ 1.45
CHFR-222ENST00000544093 CKAP5Q14008 2032 aa24.1■■□□□ 1.45
CHFR-222ENST00000544093 F5H5T6 163 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 GRAP2O75791 330 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 IL12RB1P42701 662 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 CDH18Q13634 790 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 PUM1Q14671 1186 aaKnown RBP eCLIP24.09■■□□□ 1.45
CHFR-222ENST00000544093 KLHL40Q2TBA0 621 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 PLA2G2CQ5R387 149 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 TMEM215Q68D42 235 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 KIAA1211LQ6NV74 962 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 SERPINA13PQ6UXR4 307 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 ADIPOR2Q86V24 386 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 CHSY1Q86X52 802 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.09■■□□□ 1.45
CHFR-222ENST00000544093 CDV3Q9UKY7 258 aaKnown RBP24.09■■□□□ 1.45
CHFR-222ENST00000544093 INVSQ9Y283 1065 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 NUP205Q92621 2012 aa24.09■■□□□ 1.45
CHFR-222ENST00000544093 BCLAF3A2AJT9 711 aaKnown RBP24.08■■□□□ 1.45
CHFR-222ENST00000544093 WASH3PC4AMC7 463 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 F9P00740 461 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 MMEP08473 750 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 POLR2EP19388 210 aaKnown RBP24.08■■□□□ 1.45
CHFR-222ENST00000544093 NDUFV2P19404 249 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 TACR2P21452 398 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 ZNF165P49910 485 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 NOMO3P69849 1222 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 CREB5Q02930 508 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 RABGAP1LQ5R372 815 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 ACBD5Q5T8D3 534 aaPredicted RBP24.08■■□□□ 1.45
CHFR-222ENST00000544093 SND1Q7KZF4 910 aaKnown RBP eCLIP24.08■■□□□ 1.45
CHFR-222ENST00000544093 ARCQ7LC44 396 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 APTXQ7Z2E3 356 aaKnown RBP24.08■■□□□ 1.45
CHFR-222ENST00000544093 METTL3Q86U44 580 aaKnown RBP24.08■■□□□ 1.45
CHFR-222ENST00000544093 C12orf50Q8NA57 414 aaPredicted RBP24.08■■□□□ 1.45
CHFR-222ENST00000544093 NETO1Q8TDF5 533 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 RLN3Q8WXF3 142 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 RMDN1Q96DB5 314 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 MRGPRX1Q96LB2 322 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 DLL3Q9NYJ7 618 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 STIM2Q9P246 746 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 RAD54BQ9Y620 910 aa24.08■■□□□ 1.45
CHFR-222ENST00000544093 DCHS1Q96JQ0 3298 aa24.08■■□□□ 1.44
CHFR-222ENST00000544093 M0QYT0 321 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 EPHB6O15197 1021 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 AP5Z1O43299 807 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 LUC7L3O95232 432 aaKnown RBP24.07■■□□□ 1.44
CHFR-222ENST00000544093 MOCS3O95396 460 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 DLDP09622 509 aaKnown RBP24.07■■□□□ 1.44
CHFR-222ENST00000544093 CCDC172P0C7W6 258 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 BCKDHBP21953 392 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 RPS24P62847 133 aaKnown RBP24.07■■□□□ 1.44
CHFR-222ENST00000544093 PITX1P78337 314 aaPredicted RBP24.07■■□□□ 1.44
CHFR-222ENST00000544093 FAM102AQ5T9C2 384 aaPredicted RBP24.07■■□□□ 1.44
CHFR-222ENST00000544093 RAP1GAP2Q684P5 730 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 MBLAC2Q68D91 279 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 XYLT1Q86Y38 959 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 LGI2Q8N0V4 545 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 CARNMT1Q8N4J0 409 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 PGAP3Q96FM1 320 aaPredicted RBP24.07■■□□□ 1.44
CHFR-222ENST00000544093 NPY6RQ99463 290 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 FBRSQ9HAH7 460 aa24.07■■□□□ 1.44
CHFR-222ENST00000544093 SYNJ2BP-COX16A0A087WUM0 186 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 ASLP04424 464 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 CYP1A1P04798 512 aaPredicted RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 EPHX1P07099 455 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 ATP1A3P13637 1013 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 OXCT1P55809 520 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 NME3Q13232 169 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 SLC12A1Q13621 1099 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 RSPO4Q2I0M5 234 aaPredicted RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 FUT11Q495W5 492 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 FILIP1LQ4L180 1135 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 FNDC3BQ53EP0 1204 aaKnown RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 BRMS1LQ5PSV4 323 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 NAA35Q5VZE5 725 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 ERMP1Q7Z2K6 904 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 CYP2U1Q7Z449 544 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 DHX40Q8IX18 779 aaKnown RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 SORCS1Q8WY21 1168 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 NT5C3BQ969T7 300 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 TMEM245Q9H330 911 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 PRDM16Q9HAZ2 1276 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 COX16Q9P0S2 106 aa24.06■■□□□ 1.44
CHFR-222ENST00000544093 KIAA1522Q9P206 1035 aaPredicted RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 XPO7Q9UIA9 1087 aaKnown RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.06■■□□□ 1.44
CHFR-222ENST00000544093 H0Y626 953 aa24.05■■□□□ 1.44
CHFR-222ENST00000544093 CAVIN2O95810 425 aa24.05■■□□□ 1.44
CHFR-222ENST00000544093 CD70P32970 193 aa24.05■■□□□ 1.44
CHFR-222ENST00000544093 DHPSP49366 369 aaPredicted RBP24.05■■□□□ 1.44
CHFR-222ENST00000544093 RNASE9P60153 205 aaKnown RBP24.05■■□□□ 1.44
CHFR-222ENST00000544093 FOXK2Q01167 660 aa24.05■■□□□ 1.44
CHFR-222ENST00000544093 SLC25A52Q3SY17 297 aa24.05■■□□□ 1.44
CHFR-222ENST00000544093 KDM1BQ8NB78 822 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms