RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TMEM259Q4ZIN3 620 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 NOL9Q5SY16 702 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ARMC12Q5T9G4 340 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ABHD15Q6UXT9 468 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PATL1Q86TB9 770 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PIGZQ86VD9 579 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 RIBC1Q8N443 379 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 C3orf20Q8ND61 904 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ETNPPLQ8TBG4 499 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SPPL2BQ8TCT7 592 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 BRI3BPQ8WY22 251 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ARL8AQ96BM9 186 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 DUSP9Q99956 384 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ING2Q9H160 280 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 MARCOQ9UEW3 520 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 C1QTNF3-AMACRE9PGA6 284 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PTPN3P26045 913 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CDH17Q12864 832 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ACAP1Q15027 740 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 NRBF2Q96F24 287 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 TEKT2Q9UIF3 430 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 TRHDEQ9UKU6 1024 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 LRCH1Q9Y2L9 728 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PTCH2Q9Y6C5 1203 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 O00370 1275 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 MTA2O94776 668 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 AMPD1P23109 780 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 GABRR2P28476 465 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 TNFSF9P41273 254 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 BRCC3P46736 316 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 TGM3Q08188 693 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SMARCB1Q12824 385 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CUL3Q13618 768 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 POU6F1Q14863 301 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 UGCGQ16739 394 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CBWD6Q4V339 395 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CBWD3Q5JTY5 395 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CBWD5Q5RIA9 395 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 NLRP9Q7RTR0 991 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 NLRP14Q86W24 1093 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 OR8H2Q8N162 312 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ERP27Q96DN0 273 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 HES6Q96HZ4 224 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 NEUROG2Q9H2A3 272 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 IARS2Q9NSE4 1012 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SRRDQ9UH36 339 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 KCNK1O00180 336 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PEX10O60683 326 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 TADA3O75528 432 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 LYPLA2O95372 231 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 FGRP09769 529 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SNHG28P0DPA3 235 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF7P17097 686 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PPP3CAQ08209 521 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 RCN1Q15293 331 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 OASLQ15646 514 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SETMARQ53H47 684 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ZC3H12AQ5D1E8 599 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ZC3H12BQ5HYM0 836 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 WDR59Q6PJI9 974 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 PCYOX1LQ8NBM8 494 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 JADE3Q92613 823 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 AHCYL2Q96HN2 611 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 NR1H4Q96RI1 486 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ROPN1BQ9BZX4 212 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 POLR1EQ9GZS1 481 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ROPN1Q9HAT0 212 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 ARHGAP20Q9P2F6 1191 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 STK39Q9UEW8 545 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 VPS51Q9UID3 782 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 CDY1Q9Y6F8 540 aa7.06□□□□□ -1.28
SRGAP1-206ENST00000543397 SYCE1LA8MT33 242 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 EVPLLA8MZ36 301 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 FGF10O15520 208 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ONECUT3O60422 494 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SNRPD1P62314 119 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 RAP1GAP2Q684P5 730 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 C11orf63Q6NUN7 778 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 USP45Q70EL2 814 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SH3BP5LQ7L8J4 393 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 OTOAQ7RTW8 1153 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PTAR1Q7Z6K3 402 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PIP4K2CQ8TBX8 421 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PPP1R14BQ96C90 147 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CCDC126Q96EE4 140 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NAF1Q96HR8 494 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 C12orf42Q96LP6 360 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 BBS2Q9BXC9 721 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ISCUQ9H1K1 167 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ZDHHC6Q9H6R6 413 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 OR12D3Q9UGF7 316 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ARHGAP26Q9UNA1 814 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ATRNO75882 1429 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NFAT5O94916 1531 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NCF1BA6NI72 391 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NCF1CA8MVU1 366 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms