RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 EDEM1Q92611 657 aa18.56■□□□□ 0.56
CLSTN3-214ENST00000542663 SLC6A18Q96N87 628 aa18.56■□□□□ 0.56
CLSTN3-214ENST00000542663 UBL7Q96S82 380 aaPredicted RBP18.56■□□□□ 0.56
CLSTN3-214ENST00000542663 RSPH9Q9H1X1 276 aaPredicted RBP18.56■□□□□ 0.56
CLSTN3-214ENST00000542663 A0A1W2PPC4 97 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 YJEFN3A6XGL0 299 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 C10orf142B7Z368 130 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 E7ENQ6 273 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 TLX3O43711 291 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 DFNA5O60443 496 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 LATS1O95835 1130 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 ADIGQ0VDE8 80 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 DNAJC3Q13217 504 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 INAVAQ3KP66 663 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 BSPRYQ5W0U4 402 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 KRT39Q6A163 491 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 USP30Q70CQ3 517 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 CCDC150Q8NCX0 1101 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 TATDN2Q93075 761 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 FAXDC2Q96IV6 333 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 LMLNQ96KR4 655 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 ACE2Q9BYF1 805 aaPredicted RBP18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 PABPC3Q9H361 631 aaKnown RBP18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 PCDHGA1Q9Y5H4 931 aa18.55■□□□□ 0.56
CLSTN3-214ENST00000542663 ENC1O14682 589 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 XPO1O14980 1071 aaKnown RBP18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 F13A1P00488 732 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 ATP5BP06576 529 aaKnown RBP18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 KRT13P13646 458 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 SLC6A4P31645 630 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 PSMC2P35998 433 aaKnown RBP18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 EIF2S3P41091 472 aaKnown RBP18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 GALCP54803 685 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 GOLGA7BQ2TAP0 167 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 RFWD3Q6PCD5 774 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 TTC39CQ8N584 583 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 SAP25Q8TEE9 199 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 GOLGA1Q92805 767 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 NXPE2Q96DL1 559 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 ELF4Q99607 663 aaPredicted RBP18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 PRORYQ9H606 182 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 SUN2Q9UH99 717 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 TSPAN16Q9UKR8 245 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 MAPK8IP1Q9UQF2 711 aa18.54■□□□□ 0.56
CLSTN3-214ENST00000542663 ATMQ13315 3056 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 TDRD6O60522 2096 aaKnown RBP18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 GOLGA6L7A0A1B0GV03 622 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 FAM47DPA6NHR8 397 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 WNT9AO14904 365 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 IGLV3-27P01718 113 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 POLR2EP19388 210 aaKnown RBP18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 GTF2H1P32780 548 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 C21orf59P57076 290 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 SLC8A3P57103 927 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 KCNJ12Q14500 433 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 FAM133BQ5BKY9 247 aaKnown RBP18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 PIK3R6Q5UE93 754 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 FBXL13Q8NEE6 735 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 RNF139Q8WU17 664 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 CNDP2Q96KP4 475 aaKnown RBP18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 RAB20Q9NX57 234 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 FBXL12Q9NXK8 326 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 INTS6Q9UL03 887 aaKnown RBP18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 SCML1Q9UN30 329 aa18.53■□□□□ 0.56
CLSTN3-214ENST00000542663 MGAQ8IWI9 3026 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 A0A1B0GVL5 298 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 TBL1XO60907 577 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 SIN3BO75182 1162 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 RFPL3O75679 317 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 RHOBTB3O94955 611 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 LDOC1O95751 146 aaPredicted RBP18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 MYL1P05976 194 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 JUPP14923 745 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 PFKFB1P16118 471 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 HNF1BP35680 557 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 ACADVLP49748 655 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 BST2Q10589 180 aaKnown RBP18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 ADAM9Q13443 819 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 ZCWPW2Q504Y3 356 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 MPP7Q5T2T1 576 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 C6orf118Q5T5N4 469 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 SLC39A7Q92504 469 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 TTC17Q96AE7 1141 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 MRGPRX3Q96LB0 322 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 NEUROG2Q9H2A3 272 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 LRRC4Q9HBW1 653 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 ABCC13Q9NSE7 274 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 NCKAP1Q9Y2A7 1128 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 RAI2Q9Y5P3 530 aa18.52■□□□□ 0.56
CLSTN3-214ENST00000542663 CFAP46Q8IYW2 2715 aa18.51■□□□□ 0.55
CLSTN3-214ENST00000542663 A0A1W2PP55 124 aa18.51■□□□□ 0.55
CLSTN3-214ENST00000542663 A0A1W2PR77 199 aa18.51■□□□□ 0.55
CLSTN3-214ENST00000542663 TK2O00142 265 aa18.51■□□□□ 0.55
CLSTN3-214ENST00000542663 ATXN7O15265 892 aaPredicted RBP18.51■□□□□ 0.55
CLSTN3-214ENST00000542663 MID1O15344 667 aa18.51■□□□□ 0.55
CLSTN3-214ENST00000542663 GABBR2O75899 941 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms