RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 FAM107BQ9H098 131 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 MAGEH1Q9H213 219 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 RIOX1Q9H6W3 641 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 TTC12Q9H892 705 aaPredicted RBP4.96□□□□□ -1.62
C2CD3-218ENST00000542484 VPS45Q9NRW7 570 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 ARGLU1Q9NWB6 273 aaPredicted RBP4.96□□□□□ -1.62
C2CD3-218ENST00000542484 ASIC5Q9NY37 505 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 TFCP2L1Q9NZI6 479 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 LRFN1Q9P244 771 aa4.96□□□□□ -1.62
C2CD3-218ENST00000542484 LRRFIP2Q9Y608 721 aaKnown RBP4.96□□□□□ -1.62
C2CD3-218ENST00000542484 RALGAPBQ86X10 1494 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 DNPH1O43598 174 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 EXOC3O60645 756 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 NBNO60934 754 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 MT-CO3P00414 261 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 IGLV2-14P01704 120 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 MBPP02686 304 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 TPM1P09493 284 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 TMIGD3P0DMS9 266 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 BMP5P22003 454 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 MMP8P22894 467 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 KLRK1P26718 216 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 GSTM5P46439 218 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 RENBPP51606 427 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 RBM6P78332 1123 aaKnown RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 JAKMIP3Q5VZ66 844 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 LEKR1Q6ZMV7 388 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 ARHGEF25Q86VW2 580 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 BOLLQ8N9W6 283 aaKnown RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 OR1N1Q8NGS0 311 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 WDR60Q8WVS4 1066 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 EXOC4Q96A65 974 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 KAZALD1Q96I82 304 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 R3HDMLQ9H3Y0 253 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 SAP30LQ9HAJ7 183 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 KCNK9Q9NPC2 374 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 SH3BP4Q9P0V3 963 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 STK26Q9P289 416 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 GRHPRQ9UBQ7 328 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 FZD4Q9ULV1 537 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 NFU1Q9UMS0 254 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 ZNF608Q9ULD9 1512 aaPredicted RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 PTPRKQ15262 1439 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 UHRF1BP1Q6BDS2 1440 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 PCF11O94913 1555 aaKnown RBP4.95□□□□□ -1.62
C2CD3-218ENST00000542484 REREQ9P2R6 1566 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 PTPRCP08575 1304 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 CCDC171Q6TFL3 1326 aa4.95□□□□□ -1.62
C2CD3-218ENST00000542484 TCRBV5S1A1TA0A578 114 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 LRRC3CA6NJW4 275 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 BTBD19C9JJ37 291 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 H3BNC9 293 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 FCHO1O14526 889 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 PRAMEF2O60811 474 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 RPS6KA5O75582 802 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 SMC2O95347 1197 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 IPO7O95373 1038 aaKnown RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 NUDT3O95989 172 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 TUBB4AP04350 444 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 TNNT1P13805 278 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 H2AFXP16104 143 aaPredicted RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 ZNF37AP17032 561 aaPredicted RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 COPB1P53618 953 aaKnown RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 CCDC15Q0P6D6 951 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 SEMA3BQ13214 749 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 BFSP2Q13515 415 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 FCRLBQ6BAA4 426 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 SUMO4Q6EEV6 95 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 RINT1Q6NUQ1 792 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 FBXO42Q6P3S6 717 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 TRABD2AQ86V40 505 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 EFCAB13Q8IY85 973 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 MYCT1Q8N699 235 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 FAM71DQ8N9W8 422 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 MAFAQ8NHW3 353 aaPredicted RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 TRAPPC12Q8WVT3 735 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 PRR11Q96HE9 360 aaPredicted RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 HERPUD2Q9BSE4 406 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 RTKNQ9BST9 563 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 PRDM8Q9NQV8 689 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 UBE2J1Q9Y385 318 aaPredicted RBP4.94□□□□□ -1.62
C2CD3-218ENST00000542484 CASKIN1Q8WXD9 1431 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 ELP1O95163 1332 aa4.94□□□□□ -1.62
C2CD3-218ENST00000542484 ABCC2Q92887 1545 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 FAM135AQ9P2D6 1515 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 FAM90A18PA6NE21 464 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 FAM90A16PA6NEW6 464 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 FAM90A9PA6NNJ1 464 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 FAM90A5PA8MXJ8 464 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 TMCO5BA8MYB1 307 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 RPP40O75818 363 aaKnown RBP4.93□□□□□ -1.62
C2CD3-218ENST00000542484 ACTL6BO94805 426 aa4.93□□□□□ -1.62
C2CD3-218ENST00000542484 SLU7O95391 586 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms