RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 GOLGA6L1Q8N7Z2 621 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 KLHL23Q8NBE8 558 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 CCNYQ8ND76 341 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 CCDC110Q8TBZ0 833 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 OLFM3Q96PB7 478 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 TTLL2Q9BWV7 592 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 UBE2OQ9C0C9 1292 aaKnown RBP11.36□□□□□ -0.59
SCG3-202ENST00000542355 CCSER2Q9H7U1 834 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 MED4Q9NPJ6 270 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 MARCH2Q9P0N8 246 aa11.36□□□□□ -0.59
SCG3-202ENST00000542355 ZMYND8Q9ULU4 1186 aaPredicted RBP11.36□□□□□ -0.59
SCG3-202ENST00000542355 H0YGN5 161 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 GOLGA8MH3BSY2 632 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 PRRG1O14668 218 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 TLL1O43897 1013 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 TLR5O60602 858 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 HMBSP08397 361 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SPATA31D3P0C874 917 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 ZNF135P52742 658 aaPredicted RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 AP1B1Q10567 949 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SLC29A2Q14542 456 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 TAF12Q16514 161 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CEP85LQ5SZL2 805 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SYCP2LQ5T4T6 812 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 UBAP2Q5T6F2 1119 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 ANKRD22Q5VYY1 191 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 HEATR6Q6AI08 1181 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 SPATA31D4Q6ZUB0 917 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 PDZD4Q76G19 769 aaPredicted RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 PPIL6Q8IXY8 311 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 ZCCHC9Q8N567 271 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 CPT1BQ92523 772 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CLP1Q92989 425 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 RTP4Q96DX8 246 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SLC39A13Q96H72 371 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SPACA7Q96KW9 195 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CEP295NLQ96MC4 621 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 RAD9AQ99638 391 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 EPB41L4BQ9H329 900 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 PRDM12Q9H4Q4 367 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 OLA1Q9NTK5 396 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 PAK5Q9P286 719 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 YIPF1Q9Y548 306 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 HS3ST4Q9Y661 456 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 NFS1Q9Y697 457 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 TCRBV7S3A2A0A539 114 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SLC12A8A0AV02 714 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 LCHNA4D1U4 455 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 HACD1B0YJ81 288 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 OPA1O60313 960 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 LILRB3O75022 631 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CSPG5O95196 566 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CSH1P0DML2 217 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CSH2P0DML3 217 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CTSAP10619 480 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SLC2A3P11169 496 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 VAV1P15498 845 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 ATP2A2P16615 1042 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 HMGA1P17096 107 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 MLLT6P55198 1093 aaPredicted RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 TWF1Q12792 350 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 PDK1Q15118 436 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 SPDYCQ5MJ68 293 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 NPWQ8N729 165 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 NAT8LQ8N9F0 302 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 UHMK1Q8TAS1 419 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 HTR3CQ8WXA8 447 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 HERVK_113Q902F9 699 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 QKIQ96PU8 341 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCG3-202ENST00000542355 RBM15Q96T37 977 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCG3-202ENST00000542355 ZBP1Q9H171 429 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 CDC42EP4Q9H3Q1 356 aaKnown RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 RAB6BQ9NRW1 208 aa11.35□□□□□ -0.59
SCG3-202ENST00000542355 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCG3-202ENST00000542355 COL4A4P53420 1690 aaPredicted RBP11.35□□□□□ -0.59
SCG3-202ENST00000542355 ZNF840PA6NDX5 716 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 NDC80O14777 642 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 PPP1R12AO14974 1030 aaPredicted RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 RIPK2O43353 540 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 CXCL14O95715 111 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 APOEP02649 317 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 SHBGP04278 402 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 CNPP09543 421 aaKnown RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 TUBP50607 506 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 GAD2Q05329 585 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 IFFO1Q0D2I5 559 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 FAXCQ5TGI0 409 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 DENND2CQ68D51 928 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 LRIG3Q6UXM1 1119 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 C14orf80Q86SX3 495 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 PRCCQ92733 491 aaPredicted RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 P2RY11Q96G91 374 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 CELF6Q96J87 481 aaKnown RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 SH3GL2Q99962 352 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 TMEM51Q9NW97 253 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 FNIP2Q9P278 1114 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms