RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NUP93Q8N1F7 819 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 ATP11CQ8NB49 1132 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 SPATA13Q96N96 652 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 CCT8L2Q96SF2 557 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 SEPT5Q99719 369 aaPredicted RBP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 PRMT1Q99873 361 aaKnown RBP17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 RRN3Q9NYV6 651 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 RSPH14Q9UHP6 348 aa17.77■□□□□ 0.44
TMEM50B-210ENST00000542230 TCRBV9S1A1TA0A576 114 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 SPAG7O75391 227 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 BRAFP15056 766 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 PSMB4P28070 264 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 NFE2Q16621 373 aaPredicted RBP17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 ZNF280DQ6N043 979 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 CEP128Q6ZU80 1094 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 C14orf80Q86SX3 495 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 CROCCP2Q86T23 111 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 BEGAINQ9BUH8 593 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 SF3B1O75533 1304 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■■■■■ 95.3
TMEM50B-210ENST00000542230 MTMR11A4FU01 709 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 RASA4BC9J798 803 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 C2CD2LO14523 706 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 NDUFAB1O14561 156 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 RASA4O43374 803 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 MAGEA6P43360 314 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 PDK1Q15118 436 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 SMAD1Q15797 465 aaKnown RBP17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 GIPC2Q8TF65 315 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 GORASP1Q9BQQ3 440 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 SMOC2Q9H3U7 446 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 CDY1Q9Y6F8 540 aa17.76■□□□□ 0.43
TMEM50B-210ENST00000542230 ANKRD65E5RJM6 399 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 TBC1D4O60343 1298 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 FAM155BO75949 473 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 IVLP07476 585 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 GLUD2P49448 558 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 AIF1P55008 147 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 MGAT5BQ3V5L5 792 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 C4orf33Q8N1A6 199 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 APBB2Q92870 758 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 FUBP3Q96I24 572 aaKnown RBP eCLIP17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 FCRL2Q96LA5 508 aaPredicted RBP17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 C8orf48Q96LL4 319 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 CNOT10Q9H9A5 744 aaKnown RBP17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 INTS9Q9NV88 658 aaKnown RBP17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 ARHGEF38Q9NXL2 777 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 MPP6Q9NZW5 540 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 SCML2Q9UQR0 700 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 CHD7Q9P2D1 2997 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 HACD1B0YJ81 288 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 NUMBP49757 651 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 ZBTB17Q13105 803 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 KBTBD12Q3ZCT8 623 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 TRABD2AQ86V40 505 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 UNC5BQ8IZJ1 945 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 ZNF419Q96HQ0 510 aaPredicted RBP17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 SIGLEC10Q96LC7 697 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 PAFAH2Q99487 392 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 EPAS1Q99814 870 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 STMN4Q9H169 189 aaPredicted RBP17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 ACSS3Q9H6R3 686 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 PRDM4Q9UKN5 801 aa17.75■□□□□ 0.43
TMEM50B-210ENST00000542230 CXorf49A8MYA2 514 aaPredicted RBP17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 NDC80O14777 642 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 USP12O75317 370 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 C1QAP02745 245 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 PTPN3P26045 913 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 HCAR3P49019 387 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 TAF10Q12962 218 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 SEMA5AQ13591 1074 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 TAOK1Q7L7X3 1001 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 TADA2BQ86TJ2 420 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 GDAP1Q8TB36 358 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 AGAP3Q96P47 875 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 KLF6Q99612 283 aaPredicted RBP17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 MICAL3Q7RTP6 2002 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 GMNCA6NCL1 334 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 UGT1A9O60656 530 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 MAGEA3P43357 314 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 GEMIN4P57678 1058 aaKnown RBP17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 EFEMP1Q12805 493 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 TRMT10BQ6PF06 316 aaKnown RBP17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 PID1Q7Z2X4 250 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 MON1AQ86VX9 555 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 MIB1Q86YT6 1006 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 ZNF473Q8WTR7 871 aaKnown RBP17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 TTPALQ9BTX7 342 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 UGT1A7Q9HAW7 530 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 UGT1A10Q9HAW8 530 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 UGT1A8Q9HAW9 530 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 SMYD2Q9NRG4 433 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 ZC3H7BQ9UGR2 993 aaKnown RBP17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 MAD1L1Q9Y6D9 718 aa17.74■□□□□ 0.43
TMEM50B-210ENST00000542230 SMAPO00193 183 aa17.73■□□□□ 0.43
TMEM50B-210ENST00000542230 PPP1R12AO14974 1030 aaPredicted RBP17.73■□□□□ 0.43
TMEM50B-210ENST00000542230 ZBTB24O43167 697 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms