RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 MIGA2Q7L4E1 593 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF589Q86UQ0 364 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 GPBP1Q86WP2 473 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF354CQ86Y25 554 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC34Q8IZ02 419 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF34Q8IZ26 560 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RTKN2Q8IZC4 609 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SLC38A6Q8IZM9 456 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TCAIMQ8N3R3 496 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 FBXL16Q8N461 479 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 FITM2Q8N6M3 262 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 NKAIN3Q8N8D7 197 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RBM15BQ8NDT2 890 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 FANK1Q8TC84 345 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PI4K2BQ8TCG2 481 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 OTUD7AQ8TE49 926 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 WFDC12Q8WWY7 111 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 UTP4Q969X6 686 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RELTQ969Z4 430 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MAGOHBQ96A72 148 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MTBPQ96DY7 904 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF486Q96H40 463 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 DYDC2Q96IM9 177 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TXNDC15Q96J42 360 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PLEKHA8Q96JA3 519 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 FAM20AQ96MK3 541 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 SLC6A18Q96N87 628 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ACAP3Q96P50 834 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TSGA13Q96PP4 275 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC37BQ96QE4 947 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 NUP88Q99567 741 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 DPH2Q9BQC3 489 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ALG1Q9BT22 464 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 C9orf16Q9BUW7 83 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ACAT2Q9BWD1 397 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PITHD1Q9GZP4 211 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 MKRN2Q9H000 416 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 LSG1Q9H089 658 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RNF38Q9H0F5 515 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CPNE5Q9HCH3 593 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ABHD10Q9NUJ1 306 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 PARVAQ9NVD7 372 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 INTS13Q9NVM9 706 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TAS2R1Q9NYW7 299 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 IL37Q9NZH6 218 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 DTLQ9NZJ0 730 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 NCKIPSDQ9NZQ3 722 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 APEX2Q9UBZ4 518 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 EVLQ9UI08 416 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 STOML2Q9UJZ1 356 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RAB26Q9ULW5 256 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ARHGAP26Q9UNA1 814 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 TDRKHQ9Y2W6 561 aaKnown RBP4.47□□□□□ -1.69
SNHG1-219ENST00000542112 AP4S1Q9Y587 144 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CACNG2Q9Y698 323 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CPDO75976 1380 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CARMIL3Q8ND23 1372 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 RTL9Q8NET4 1388 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 CDC42BPGQ6DT37 1551 aa4.47□□□□□ -1.69
SNHG1-219ENST00000542112 ADGRA3Q8IWK6 1321 aa4.46□□□□□ -1.69
SNHG1-219ENST00000542112 FAM86C2PA6NEL3 165 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 PRSS44E7EML9 344 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 H0Y858 1186 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 H0YJX3 145 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 AGRPO00253 132 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 FOXP2O15409 715 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 MAGEB3O15480 346 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ZBTB14O43829 449 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 SUSD5O60279 629 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 PPP6R2O75170 966 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 SERPINI2O75830 405 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 CIB2O75838 187 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 HEXIM1O94992 359 aaKnown RBP4.46□□□□□ -1.7
SNHG1-219ENST00000542112 EPN2O95208 641 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ARIH2O95376 493 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 APBB3O95704 486 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 POP4O95707 220 aaKnown RBP4.46□□□□□ -1.7
SNHG1-219ENST00000542112 FUCA1P04066 466 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 TFAP2AP05549 437 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ZCCHC18P0CG32 403 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 PRKAR1AP10644 381 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 SLC2A3P11169 496 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ATP1A3P13637 1013 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ETS2P15036 469 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF23P17027 643 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 RAB6AP20340 208 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 TCEA1P23193 301 aaKnown RBP4.46□□□□□ -1.7
SNHG1-219ENST00000542112 F8A1P23610 371 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 GRK2P25098 689 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 CTNNA2P26232 953 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 NOS3P29474 1203 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 HOXA6P31267 233 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-219ENST00000542112 SLC5A2P31639 672 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 SHMT1P34896 483 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 TALDO1P37837 337 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 PTPN9P43378 593 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ADCY7P51828 1080 aa4.46□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF135P52742 658 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms