RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 OR2T3Q8NH03 318 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 ADAM32Q8TC27 787 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 WFIKKN2Q8TEU8 576 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 FOXJ1Q92949 421 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 MRGPRX3Q96LB0 322 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 NUCKS1Q9H1E3 243 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 MTG2Q9H4K7 406 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 DNAAF2Q9NVR5 837 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 TLR6Q9Y2C9 796 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 CEP295Q9C0D2 2601 aa12.27□□□□□ -0.45
CLSTN3-211ENST00000541667 E5RJQ4 531 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 IRAK2O43187 625 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 LETM1O95202 739 aaPredicted RBP12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 DLDP09622 509 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 KRT5P13647 590 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 SPINK2P20155 84 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 OXTRP30559 389 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 ACSL1P33121 698 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 ACADSBP45954 432 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 SLC11A2P49281 568 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 RPS14P62263 151 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 ZNF252P-AS1Q0IIN9 211 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 DCAF6Q58WW2 860 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 SERPINA13PQ6UXR4 307 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 MMS22LQ6ZRQ5 1243 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 ENOSF1Q7L5Y1 443 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 AHI1Q8N157 1196 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 CFAP52Q8N1V2 620 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 MINDY1Q8N5J2 469 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 SHC3Q92529 594 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 PRMT1Q99873 361 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 NUP58Q9BVL2 599 aa12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 GTPBP2Q9BX10 602 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-211ENST00000541667 KCNU1A8MYU2 1149 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 FGFR1OPO95684 399 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 CLCN1P35523 988 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 YWHAZP63104 245 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 E2F5Q15329 346 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 PLEKHG6Q3KR16 790 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 ZC3H12AQ5D1E8 599 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 WDR45BQ5MNZ6 344 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 SYCP2LQ5T4T6 812 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 DCAF12L1Q5VU92 463 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 RABEPKQ7Z6M1 372 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 RGL4Q8IZJ4 473 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 CAMK1GQ96NX5 476 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 SERPINB11Q96P15 392 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 SLC2A13Q96QE2 648 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 THAP9Q9H5L6 903 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 C6orf106Q9H6K1 298 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 ST7Q9NRC1 585 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 STIM2Q9P246 746 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 APEX2Q9UBZ4 518 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 PLA2G4CQ9UP65 541 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 WDFY3Q8IZQ1 3526 aa12.25□□□□□ -0.45
CLSTN3-211ENST00000541667 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 A0A1B0GTW7 788 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 SPAARA0A1B0GVQ0 90 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 GTPBP10A4D1E9 387 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 FOXN3O00409 490 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 SART1O43290 800 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 THAP12O43422 761 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 TRUB2O95900 331 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 POLR2EP19388 210 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 GNA15P30679 374 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 CSKP41240 450 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 CTSOP43234 321 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 KCNMA1Q12791 1236 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 FOXC1Q12948 553 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 GRIK2Q13002 908 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 PDCLQ13371 301 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 ST3GAL2Q16842 350 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 FNDC3BQ53EP0 1204 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 MIIPQ5JXC2 388 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 ARTNQ5T4W7 220 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 C9orf64Q5T6V5 341 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 GBP6Q6ZN66 633 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 DBX2Q6ZNG2 339 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 CACUL1Q86Y37 369 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 APCDD1Q8J025 514 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 MLKLQ8NB16 471 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 HJURPQ8NCD3 748 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 FAM149B1Q96BN6 582 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 CPXM1Q96SM3 734 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 FAM129BQ96TA1 746 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 ADAM33Q9BZ11 813 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 RSPH9Q9H1X1 276 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 LHX5Q9H2C1 402 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 IL21RQ9HBE5 538 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 POPDC2Q9HBU9 364 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 PCDHGC3Q9UN70 934 aa12.24□□□□□ -0.45
CLSTN3-211ENST00000541667 CABIN1Q9Y6J0 2220 aa12.23□□□□□ -0.45
CLSTN3-211ENST00000541667 FAM221BA6H8Z2 402 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms