RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PIGVQ9NUD9 493 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 THAP10Q9P2Z0 257 aaPredicted RBP13.58□□□□□ -0.24
LTBR-208ENST00000541005 SLC12A6Q9UHW9 1150 aa13.58□□□□□ -0.24
LTBR-208ENST00000541005 WDR87Q6ZQQ6 2873 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 CACNA1EQ15878 2313 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 A0A1W2PQF6 199 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 A0A1W2PQJ5 194 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 GOLGA8SH3BPF8 625 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 TBL1XO60907 577 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 ALDH1A2O94788 518 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 CALB1P05937 261 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 HOXB2P14652 356 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 TFE3P19532 575 aaPredicted RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 TACR2P21452 398 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 SULT1E1P49888 294 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 RPS24P62847 133 aaKnown RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 C1QBPQ07021 282 aaKnown RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 NME3Q13232 169 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 TTC39BQ5VTQ0 682 aaPredicted RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 E4F1Q66K89 784 aaPredicted RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 TMEM215Q68D42 235 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 PPP1R2P3Q6NXS1 205 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 LRSAM1Q6UWE0 723 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 ADIPOR2Q86V24 386 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 CHSY1Q86X52 802 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 CHPFQ8IZ52 775 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 MDGA1Q8NFP4 955 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 FIBINQ8TAL6 211 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 WFDC5Q8TCV5 224 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 ACOX2Q99424 681 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 TSPY26PQ9H489 355 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 POLMQ9NP87 494 aaPredicted RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 METTL5Q9NRN9 209 aaKnown RBP13.57□□□□□ -0.24
LTBR-208ENST00000541005 ABCB8Q9NUT2 735 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 ARHGEF38Q9NXL2 777 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 GGA2Q9UJY4 613 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 NUMA1Q14980 2115 aa13.57□□□□□ -0.24
LTBR-208ENST00000541005 TCRBV5S1A1TA0A578 114 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 C2CD4BA6NLJ0 364 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 F5H5T6 163 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 RPP40O75818 363 aaKnown RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 ENDOD1O94919 500 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 LUC7L3O95232 432 aaKnown RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 PABPC1P11940 636 aaKnown RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 PXNP49023 591 aaPredicted RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 SRSF5Q13243 272 aaKnown RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 SIM2Q14190 667 aaPredicted RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 ASIC2Q16515 512 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 C5orf22Q49AR2 442 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 ACBD5Q5T8D3 534 aaPredicted RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 RAP1GAP2Q684P5 730 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 SDE2Q6IQ49 451 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 MFN1Q8IWA4 741 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 LGI2Q8N0V4 545 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 C3orf20Q8ND61 904 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 RUBCNQ92622 972 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 SYN2Q92777 582 aaPredicted RBP13.56□□□□□ -0.24
LTBR-208ENST00000541005 TBCBQ99426 244 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 ADAM22Q9P0K1 906 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 ITIH6Q6UXX5 1313 aa13.56□□□□□ -0.24
LTBR-208ENST00000541005 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 A0A1B0GVM2 712 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 TCRBV21S2A2A0A5A6 115 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 TCAF2A6NFQ2 919 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 I6L893 689 aaPredicted RBP13.55□□□□□ -0.24
LTBR-208ENST00000541005 PAGE1O75459 146 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 C7P10643 843 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 CD70P32970 193 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 RDXP35241 583 aaKnown RBP13.55□□□□□ -0.24
LTBR-208ENST00000541005 PTPN9P43378 593 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 CDH18Q13634 790 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 AUHQ13825 339 aaKnown RBP13.55□□□□□ -0.24
LTBR-208ENST00000541005 RABGAP1LQ5R372 815 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 ACAD10Q6JQN1 1059 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 FBXL22Q6P050 247 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.242e-6■□□□□ 10
LTBR-208ENST00000541005 CHST9Q7L1S5 443 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 C11orf74Q86VG3 221 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 RNF34Q969K3 372 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 VCPIP1Q96JH7 1222 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 ZC3H10Q96K80 434 aaKnown RBP13.55□□□□□ -0.24
LTBR-208ENST00000541005 CFAP57Q96MR6 1250 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 WDCPQ9H6R7 721 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 SEPT11Q9NVA2 429 aaKnown RBP13.55□□□□□ -0.24
LTBR-208ENST00000541005 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 IFNKQ9P0W0 207 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 RAB23Q9ULC3 237 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 HS3ST4Q9Y661 456 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 STON1Q9Y6Q2 735 aa13.55□□□□□ -0.24
LTBR-208ENST00000541005 FAM170AA1A519 330 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms