RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 DRD1P21728 446 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 MIPP30301 263 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 GJA4P35212 333 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 MAGEA9P43362 315 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 STARD6P59095 220 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 OGDHQ02218 1023 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 AUHQ13825 339 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 FBXO43Q4G163 708 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 ODF2Q5BJF6 829 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 FAM133BQ5BKY9 247 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 CHST9Q7L1S5 443 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 VSIG1Q86XK7 387 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 DNAAF5Q86Y56 855 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 SYNPOQ8N3V7 929 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 RIN3Q8TB24 985 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 PRMT1Q99873 361 aaKnown RBP18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 ZWILCHQ9H900 591 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 OSGEPQ9NPF4 335 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 GTSE1Q9NYZ3 720 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 DEC1Q9P2X7 70 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 FZD10Q9ULW2 581 aa18.1■□□□□ 0.49
CLSTN3-210ENST00000540931 CACNA1HO95180 2353 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 A0A1B0GVM2 712 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TCAF2A6NFQ2 919 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TMEM221A6NGB7 291 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 M0R296 226 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 GFRA2O00451 464 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TRDMT1O14717 391 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 FGF10O15520 208 aaPredicted RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TIMM44O43615 452 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 NARSO43776 548 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TYRP14679 529 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 ARSAP15289 507 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TFE3P19532 575 aaPredicted RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 MSNP26038 577 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 CTHP32929 405 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 ETFBP38117 255 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 HCAR3P49019 387 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 CDH4P55283 916 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 GRSF1Q12849 480 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 MESDQ14696 234 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 PDK2Q15119 407 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TRIM68Q6AZZ1 485 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TPGS1Q6ZTW0 290 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 TMEM25Q86YD3 366 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 LGI2Q8N0V4 545 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 ACRBPQ8NEB7 543 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 KCNV2Q8TDN2 545 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 CD101Q93033 1021 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 PBXIP1Q96AQ6 731 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 ASIC4Q96FT7 647 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 RPRD1AQ96P16 312 aaPredicted RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 PNKPQ96T60 521 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 P2RY13Q9BPV8 354 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 IER2Q9BTL4 223 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 SIK2Q9H0K1 926 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 DDX56Q9NY93 547 aaKnown RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 RCOR3Q9P2K3 495 aaPredicted RBP18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 SLC27A6Q9Y2P4 619 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 HS3ST4Q9Y661 456 aa18.09■□□□□ 0.49
CLSTN3-210ENST00000540931 IGLV3-10A0A075B6K4 115 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 DRGXA6NNA5 263 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 NEDD8-MDP1E9PL57 170 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 NPC1O15118 1278 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 SPOPO43791 374 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 MOCS3O95396 460 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 ARL4AP40617 200 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 SSR1P43307 286 aaKnown RBP18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 TNK2Q07912 1038 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 ZNF252P-AS1Q0IIN9 211 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 LRRC32Q14392 662 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 DMC1Q14565 340 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 DGKKQ5KSL6 1271 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 SH3PXD2AQ5TCZ1 1133 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 FYB2Q5VWT5 728 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 RAP1GAP2Q684P5 730 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 RNF43Q68DV7 783 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 ZNF783Q6ZMS7 281 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 DAAM2Q86T65 1068 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 SETD3Q86TU7 594 aaPredicted RBP18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 RHOT1Q8IXI2 618 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 WFIKKN2Q8TEU8 576 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 FAM3CQ92520 227 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 WBP2Q969T9 261 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 ZYG11BQ9C0D3 744 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 MFSD1Q9H3U5 465 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 HEBP1Q9NRV9 189 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 CALCOCO1Q9P1Z2 691 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 FBXO10Q9UK96 956 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 AP4E1Q9UPM8 1137 aa18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 REXO2Q9Y3B8 237 aaKnown RBP18.08■□□□□ 0.48
CLSTN3-210ENST00000540931 A0A0A0MRY4 1105 aa18.07■□□□□ 0.48
CLSTN3-210ENST00000540931 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.07■□□□□ 0.48
CLSTN3-210ENST00000540931 KANSL1LA0AUZ9 987 aa18.07■□□□□ 0.48
CLSTN3-210ENST00000540931 E9PAM4 449 aa18.07■□□□□ 0.48
CLSTN3-210ENST00000540931 TBL1XO60907 577 aa18.07■□□□□ 0.48
CLSTN3-210ENST00000540931 APODP05090 189 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms