RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CFAP57Q96MR6 1250 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 GABRG3Q99928 467 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 XPO4Q9C0E2 1151 aaKnown RBP17.49■□□□□ 0.39
CD9-209ENST00000540891 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 ABCB8Q9NUT2 735 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 ELOVL2Q9NXB9 296 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 ARHGEF38Q9NXL2 777 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 CACNA2D2Q9NY47 1150 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 TAS2R14Q9NYV8 317 aa17.49■□□□□ 0.39
CD9-209ENST00000540891 THAP10Q9P2Z0 257 aaPredicted RBP17.49■□□□□ 0.39
CD9-209ENST00000540891 SMG5Q9UPR3 1016 aaKnown RBP17.49■□□□□ 0.39
CD9-209ENST00000540891 MYO18AQ92614 2054 aaKnown RBP17.49■□□□□ 0.39
CD9-209ENST00000540891 A0A1W2PQJ5 194 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 WASH3PC4AMC7 463 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 PAGE1O75459 146 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 ADCY5O95622 1261 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 PABPC1P11940 636 aaKnown RBP17.48■□□□□ 0.39
CD9-209ENST00000540891 HOXB2P14652 356 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 ABCB4P21439 1286 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 GGCXP38435 758 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 DEUP1Q05D60 604 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 ENPP2Q13822 863 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 EIF4HQ15056 248 aaKnown RBP17.48■□□□□ 0.39
CD9-209ENST00000540891 RAB6CQ53S08 254 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 FSCBQ5H9T9 825 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 ACAD10Q6JQN1 1059 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 KIAA1211LQ6NV74 962 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 FBXL22Q6P050 247 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 MFN1Q8IWA4 741 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 CHPFQ8IZ52 775 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 RNF214Q8ND24 703 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 FIBINQ8TAL6 211 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 GAB3Q8WWW8 586 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 RNF34Q969K3 372 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 NUP58Q9BVL2 599 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 TKTL2Q9H0I9 626 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 RAB6CQ9H0N0 254 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 SLC12A6Q9UHW9 1150 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 GGA2Q9UJY4 613 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 HS3ST4Q9Y661 456 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 EML5Q05BV3 1969 aa17.48■□□□□ 0.39
CD9-209ENST00000540891 PIEZO1Q92508 2521 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 TCRBV21S2A2A0A5A6 115 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 C2CD4BA6NLJ0 364 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 F5H5T6 163 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 ENDOD1O94919 500 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 LUC7L3O95232 432 aaKnown RBP17.47■□□□□ 0.39
CD9-209ENST00000540891 CALB1P05937 261 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 SKILP12757 684 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 TNFAIP3P21580 790 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 IL12RB1P42701 662 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 IRAK1P51617 712 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
CD9-209ENST00000540891 LMAN2Q12907 356 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 ZNF234Q14588 700 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 BRMS1LQ5PSV4 323 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 ARTNQ5T4W7 220 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 CHST9Q7L1S5 443 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 C14orf80Q86SX3 495 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 C3orf20Q8ND61 904 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 WFIKKN2Q8TEU8 576 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 RXFP2Q8WXD0 754 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 IGSF8Q969P0 613 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 TPSD1Q9BZJ3 242 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 CIPCQ9C0C6 399 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 WDCPQ9H6R7 721 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 POLMQ9NP87 494 aaPredicted RBP17.47■□□□□ 0.39
CD9-209ENST00000540891 TMPRSS4Q9NRS4 437 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 INTS6Q9UL03 887 aaKnown RBP17.47■□□□□ 0.39
CD9-209ENST00000540891 RAD54BQ9Y620 910 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 STON1Q9Y6Q2 735 aa17.47■□□□□ 0.39
CD9-209ENST00000540891 ZFHX2Q9C0A1 2572 aaPredicted RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 MUC22E2RYF6 1773 aaPredicted RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 TYW5A2RUC4 315 aaKnown RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 DDX3XO00571 662 aaKnown RBP eCLIP17.46■□□□□ 0.39
CD9-209ENST00000540891 RPP40O75818 363 aaKnown RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 F9P00740 461 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 GYPCP04921 128 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 KRT3P12035 628 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 RDXP35241 583 aaKnown RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 RFC1P35251 1148 aaPredicted RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 ATP11AP98196 1134 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 AUHQ13825 339 aaKnown RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 SIM2Q14190 667 aaPredicted RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 LPAL2Q16609 132 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 C15orf59Q2T9L4 293 aaPredicted RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 FUT11Q495W5 492 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 CCDC14Q49A88 953 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 SH3PXD2AQ5TCZ1 1133 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 HGSNATQ68CP4 663 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 CIR1Q86X95 450 aaPredicted RBP17.46■□□□□ 0.39
CD9-209ENST00000540891 DNAAF5Q86Y56 855 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 MCOLN2Q8IZK6 566 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 CARNMT1Q8N4J0 409 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 UCMAQ8WVF2 138 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 ERLEC1Q96DZ1 483 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 CAPN11Q9UMQ6 739 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 SNX10Q9Y5X0 201 aa17.46■□□□□ 0.39
CD9-209ENST00000540891 GPR179Q6PRD1 2367 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms