RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 IRX2Q9BZI1 471 aaPredicted RBP14.7□□□□□ -0.06
SNHG1-213ENST00000540725 FBRSQ9HAH7 460 aa14.7□□□□□ -0.06
SNHG1-213ENST00000540725 MAN1B1Q9UKM7 699 aa14.7□□□□□ -0.06
SNHG1-213ENST00000540725 PCDHB9Q9Y5E1 797 aa14.7□□□□□ -0.06
SNHG1-213ENST00000540725 GOLGA6L7A0A1B0GV03 622 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 P4HA2O15460 535 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 IRAK2O43187 625 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 ACSL4O60488 711 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 FBXO21O94952 628 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 CER1O95813 267 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 ATP5BP06576 529 aaKnown RBP14.69□□□□□ -0.06
SNHG1-213ENST00000540725 DLDP09622 509 aaKnown RBP14.69□□□□□ -0.06
SNHG1-213ENST00000540725 C7P10643 843 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 POLR2EP19388 210 aaKnown RBP14.69□□□□□ -0.06
SNHG1-213ENST00000540725 SLC6A4P31645 630 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 CD70P32970 193 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 ACSL1P33121 698 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 MATKP42679 507 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 TBX4P57082 545 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 NUCB2P80303 420 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 BNC1Q01954 994 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 TTI2Q6NXR4 508 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 RRAGAQ7L523 313 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 ARHGEF19Q8IW93 802 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 C1orf216Q8TAB5 229 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 SNX19Q92543 992 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 MIS12Q9H081 205 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 C6orf106Q9H6K1 298 aaPredicted RBP14.69□□□□□ -0.06
SNHG1-213ENST00000540725 GAREM1Q9H706 876 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 IL21RQ9HBE5 538 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 PRSS16Q9NQE7 514 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 RALYQ9UKM9 306 aaKnown RBP14.69□□□□□ -0.06
SNHG1-213ENST00000540725 KNTC1P50748 2209 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 PLXNA2O75051 1894 aa14.69□□□□□ -0.06
SNHG1-213ENST00000540725 FAM221BA6H8Z2 402 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 FTH1P19P0C7X4 201 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 ZNF883P0CG24 379 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 RPS14P62263 151 aaKnown RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 GCNT1Q02742 428 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 NADSYN1Q6IA69 706 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 IL27RAQ6UWB1 636 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 ELOA2Q8IYF1 753 aaPredicted RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 ZNF557Q8N988 423 aaPredicted RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 HJURPQ8NCD3 748 aaPredicted RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 NELFBQ8WX92 580 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 AZIN2Q96A70 460 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 FCRL2Q96LA5 508 aaPredicted RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 PRICKLE1Q96MT3 831 aaPredicted RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 STIM2Q9P246 746 aa14.68□□□□□ -0.06
SNHG1-213ENST00000540725 FNDC3AQ9Y2H6 1198 aaKnown RBP14.68□□□□□ -0.06
SNHG1-213ENST00000540725 ITPR1Q14643 2758 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 A0A1B0GVT2 93 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 SRRM3A6NNA2 597 aaPredicted RBP14.67□□□□□ -0.06
SNHG1-213ENST00000540725 CBFA2T3O75081 653 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 SEMA4FO95754 770 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 DNTTP04053 509 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 FYNP06241 537 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 BMP6P22004 513 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 ZBTB16Q05516 673 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 BECN1Q14457 450 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 HLA-BQ31612 363 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 TTC31Q49AM3 519 aaPredicted RBP14.67□□□□□ -0.06
SNHG1-213ENST00000540725 FOXR2Q6PJQ5 311 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 MFN1Q8IWA4 741 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 TRIM59Q8IWR1 403 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 EHBP1Q8NDI1 1231 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 DQX1Q8TE96 717 aaKnown RBP14.67□□□□□ -0.06
SNHG1-213ENST00000540725 SETD7Q8WTS6 366 aaKnown RBP14.67□□□□□ -0.06
SNHG1-213ENST00000540725 ADAMTS14Q8WXS8 1223 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 FAM149B1Q96BN6 582 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 KREMEN1Q96MU8 473 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 SERPINB11Q96P15 392 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 DDX50Q9BQ39 737 aaKnown RBP14.67□□□□□ -0.06
SNHG1-213ENST00000540725 BTBD1Q9H0C5 482 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 ST7Q9NRC1 585 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 TM7SF3Q9NS93 570 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 SUN2Q9UH99 717 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 PCOLCE2Q9UKZ9 415 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 CTNND2Q9UQB3 1225 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.67□□□□□ -0.06
SNHG1-213ENST00000540725 SLCO1B1Q9Y6L6 691 aa14.67□□□□□ -0.06
SNHG1-213ENST00000540725 BICDL2A1A5D9 508 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 TYW5A2RUC4 315 aaKnown RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 PPP1R3GB7ZBB8 358 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 SART1O43290 800 aaKnown RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 GPD2P43304 727 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 CSNK1EP49674 416 aaKnown RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 AFF3P51826 1226 aaKnown RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 RPS24P62847 133 aaKnown RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 NNTQ13423 1086 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 ZNF776Q68DI1 518 aaPredicted RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 GLRX5Q86SX6 157 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 PNPLA1Q8N8W4 532 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 FIBINQ8TAL6 211 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 TTC17Q96AE7 1141 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 MYEOVQ96EZ4 313 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 LMLNQ96KR4 655 aa14.66□□□□□ -0.06
SNHG1-213ENST00000540725 NUCKS1Q9H1E3 243 aaKnown RBP14.66□□□□□ -0.06
SNHG1-213ENST00000540725 MTG2Q9H4K7 406 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms