RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 LRRC4CQ9HCJ2 640 aa8.56□□□□□ -1.04
C2CD3-215ENST00000540452 RAB6BQ9NRW1 208 aa8.56□□□□□ -1.04
C2CD3-215ENST00000540452 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.56□□□□□ -1.04
C2CD3-215ENST00000540452 ABI2Q9NYB9 513 aaPredicted RBP8.56□□□□□ -1.04
C2CD3-215ENST00000540452 PSMC3IPQ9P2W1 217 aaPredicted RBP8.56□□□□□ -1.04
C2CD3-215ENST00000540452 SAE1Q9UBE0 346 aaPredicted RBP8.56□□□□□ -1.04
C2CD3-215ENST00000540452 ZNF180Q9UJW8 692 aa8.56□□□□□ -1.04
C2CD3-215ENST00000540452 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
C2CD3-215ENST00000540452 SSX2IPQ9Y2D8 614 aa8.56□□□□□ -1.04
C2CD3-215ENST00000540452 HBS1LQ9Y450 684 aaKnown RBP8.56□□□□□ -1.04
C2CD3-215ENST00000540452 IGLV3-10A0A075B6K4 115 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TBKBP1A7MCY6 615 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 MFSD11O43934 449 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 CACNG3O60359 315 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TMEM63AO94886 807 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 SUN1O94901 812 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 IGLV3-27P01718 113 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 APOEP02649 317 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 AMHP03971 560 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 SOD2P04179 222 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ZSCAN5DPP0CG00 497 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 HAPLN1P10915 354 aaPredicted RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 CPB1P15086 417 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 AMPD1P23109 780 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 CNTFP26441 200 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 GARSP41250 739 aaKnown RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 IRAK1P51617 712 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ATXN1P54253 815 aaKnown RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 MLLT6P55198 1093 aaPredicted RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 MAGOHP61326 146 aaKnown RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TLE2Q04725 743 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TNK2Q07912 1038 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 DNAJC3Q13217 504 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TRIP4Q15650 581 aaPredicted RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ANKRD20A2Q5SQ80 823 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ANKRD20A1Q5TYW2 823 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ANKRD20A3Q5VUR7 823 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 RTL10Q7L3V2 364 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 SCD5Q86SK9 330 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ZBED8Q8IZ13 594 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ATP6V0D2Q8N8Y2 350 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 OR2W6PQ8NHA6 318 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 DPF3Q92784 378 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 AZIN2Q96A70 460 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TRMT2BQ96GJ1 504 aaKnown RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 SGSM3Q96HU1 749 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 IGSF21Q96ID5 467 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 DHRS4Q9BTZ2 278 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 HERC2P3Q9BVR0 1158 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 GPR62Q9BZJ7 368 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 EPN3Q9H201 632 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 HAUS2Q9NVX0 235 aa8.55□□□□□ -1.04
C2CD3-215ENST00000540452 AFF4Q9UHB7 1163 aaKnown RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 SMG5Q9UPR3 1016 aaKnown RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 PRG3Q9Y2Y8 225 aaPredicted RBP8.55□□□□□ -1.04
C2CD3-215ENST00000540452 ATXN2Q99700 1313 aaKnown RBP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 CHD5Q8TDI0 1954 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 MAGEB16A2A368 324 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 PRPF4O43172 522 aaKnown RBP eCLIP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 CREB3O43889 395 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 LRIG2O94898 1065 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 ABLIM3O94929 683 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 LATS1O95835 1130 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 FAM107AO95990 144 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 TIMP1P01033 207 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 CSH1P0DML2 217 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 CSH2P0DML3 217 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 ETS1P14921 441 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 PFKLP17858 780 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 PRKCHP24723 683 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 EPHB2P29323 1055 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 LSP1P33241 339 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 NDST2P52849 883 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 PITX1P78337 314 aaPredicted RBP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 IFI35P80217 286 aaPredicted RBP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 DSG1Q02413 1049 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 ANO4Q32M45 955 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 TRIM60Q495X7 471 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 C5orf22Q49AR2 442 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 LGSNQ5TDP6 509 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 TMCO4Q5TGY1 634 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 AFMIDQ63HM1 303 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 STEAP4Q687X5 459 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 KCTD16Q68DU8 428 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 LRRC8BQ6P9F7 803 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 PALM2Q8IXS6 379 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 PYROXD2Q8N2H3 581 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 TMEM199Q8N511 208 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 FBXO22Q8NEZ5 403 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 MAML1Q92585 1016 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 ARHGEF2Q92974 986 aaKnown RBP8.54□□□□□ -1.04
C2CD3-215ENST00000540452 RNF34Q969K3 372 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 MTBPQ96DY7 904 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 P2RY11Q96G91 374 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 ZNF558Q96NG5 402 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 GBA3Q9H227 469 aa8.54□□□□□ -1.04
C2CD3-215ENST00000540452 CENPHQ9H3R5 247 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms