RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 DNAJC28Q9NX36 388 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 AP4B1Q9Y6B7 739 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 CFLARO15519 480 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 GLRA3O75311 464 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 CILPO75339 1184 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 NELFEP18615 380 aaKnown RBP14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MAGEA6P43360 314 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 SERPINB9P50453 376 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MS4A2Q01362 244 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 LAMTOR4Q0VGL1 99 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 PDK1Q15118 436 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 STYK1Q6J9G0 422 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 XRRA1Q6P2D8 792 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MARK4Q96L34 752 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 LGMNQ99538 433 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 LPIN3Q9BQK8 851 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MTMR10Q9NXD2 777 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 ARHGAP26Q9UNA1 814 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 SSX2IPQ9Y2D8 614 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 TRPA1O75762 1119 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 SRGAP2BP0DMP2 458 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 TCN1P20061 433 aaPredicted RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 TYK2P29597 1187 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 RPL5P46777 297 aaKnown RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 IRF9Q00978 393 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 NIPAL4Q0D2K0 466 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 TARBP2Q15633 366 aaKnown RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 EML3Q32P44 896 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 MAP7D3Q8IWC1 876 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 FAM156AQ8NDB6 213 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 ITFG2Q969R8 447 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 LRRC39Q96DD0 335 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 NLRP4Q96MN2 994 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 CDRT15Q96T59 188 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 CAB39LQ9H9S4 337 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 PTPRFP10586 1907 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 ATP5BP06576 529 aaKnown RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 PFKMP08237 780 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 TGM2P21980 687 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 PMF1Q6P1K2 205 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 ILDR2Q71H61 639 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 LCA5Q86VQ0 697 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 MARVELD2Q8N4S9 558 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 REPS2Q8NFH8 660 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 ARNTL2Q8WYA1 636 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 NIFKQ9BYG3 293 aaKnown RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 FRMD8Q9BZ67 464 aaPredicted RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 DHX35Q9H5Z1 703 aaKnown RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 MINDY3Q9H8M7 445 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 DNAAF2Q9NVR5 837 aaKnown RBP14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 TSPAN16Q9UKR8 245 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 PSMD13Q9UNM6 376 aa14.3□□□□□ -0.12
SCNN1A-215ENST00000540037 INO80B-WBP1J3KQ70 363 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 ATP9BO43861 1147 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 CHRNGP07510 517 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 IQCF3P0C7M6 154 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 RGS2P41220 211 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 HMGCS2P54868 508 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 ACAP1Q15027 740 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 TMEM198Q66K66 360 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 PTAR1Q7Z6K3 402 aaPredicted RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 AMIGO2Q86SJ2 522 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 SNX32Q86XE0 403 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 PYROXD2Q8N2H3 581 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 CLEC4CQ8WTT0 213 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 APBB2Q92870 758 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 BTBD9Q96Q07 612 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 INO80BQ9C086 356 aaPredicted RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 SENP6Q9GZR1 1112 aaPredicted RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 RBM38Q9H0Z9 239 aaKnown RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 FAM49BQ9NUQ9 324 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 PTTG2Q9NZH5 202 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 TMCO1Q9UM00 188 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 H3BSA7 217 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 MAGEB3O15480 346 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 AP1G1O43747 822 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 PENKP01210 267 aaPredicted RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 LTFP02788 710 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 CPA3P15088 417 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 EPHA3P29320 983 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 DPP6P42658 865 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 NDST1P52848 882 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 HDAC4P56524 1084 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 XIAPP98170 497 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 JADE1Q6IE81 842 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 B3GNT6Q6ZMB0 384 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 GRIN3AQ8TCU5 1115 aa14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 KHSRPQ92945 711 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 LIN28AQ9H9Z2 209 aaKnown RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
SCNN1A-215ENST00000540037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.28□□□□□ -0.12
SCNN1A-215ENST00000540037 DENRO43583 198 aaKnown RBP14.28□□□□□ -0.12
SCNN1A-215ENST00000540037 PEX1O43933 1283 aa14.28□□□□□ -0.12
SCNN1A-215ENST00000540037 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
SCNN1A-215ENST00000540037 PHKA2P46019 1235 aa14.28□□□□□ -0.12
SCNN1A-215ENST00000540037 GRM1Q13255 1194 aa14.28□□□□□ -0.12
SCNN1A-215ENST00000540037 EPGNQ6UW88 154 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms