RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 RTN3O95197 1032 aaPredicted RBP23.12■■□□□ 1.29
HOMER3-204ENST00000539827 APRTP07741 180 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 GLUD2P49448 558 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 ZNF135P52742 658 aaPredicted RBP23.12■■□□□ 1.29
HOMER3-204ENST00000539827 TAF10Q12962 218 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 SPATA13Q96N96 652 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 SERPINB11Q96P15 392 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 HAPLN3Q96S86 360 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 MTRRQ9UBK8 725 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 PRDM4Q9UKN5 801 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 CHMP2BQ9UQN3 213 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 ABHD14A-ACY1A0A1B0GW23 586 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 RNF103O00237 685 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 TIMP1P01033 207 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 IVLP07476 585 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 ACRP10323 421 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 HSPA8P11142 646 aaKnown RBP23.12■■□□□ 1.29
HOMER3-204ENST00000539827 SSTR1P30872 391 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 OR1D2P34982 312 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 IRAK1P51617 712 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 EFEMP1Q12805 493 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 SMARCB1Q12824 385 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 TNFAIP8L3Q5GJ75 292 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 RASIP1Q5U651 963 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 MSANTD2Q6P1R3 559 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 PPP1R21Q6ZMI0 780 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 IGDCC3Q8IVU1 814 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 DEPDC1BQ8WUY9 529 aa23.12■■□□□ 1.29
HOMER3-204ENST00000539827 OXCT2Q9BYC2 517 aaPredicted RBP23.12■■□□□ 1.29
HOMER3-204ENST00000539827 MRPL42Q9Y6G3 142 aaKnown RBP23.12■■□□□ 1.29
HOMER3-204ENST00000539827 FOXO6A8MYZ6 492 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 ELK3P41970 407 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 MAGEA6P43360 314 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 PPP2R5DQ14738 602 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 KIAA1841Q6NSI8 718 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 PALM2Q8IXS6 379 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 COLGALT1Q8NBJ5 622 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 C2orf15Q8WU43 125 aaKnown RBP23.11■■□□□ 1.29
HOMER3-204ENST00000539827 SPATA17Q96L03 361 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 TBK1Q9UHD2 729 aa23.11■■□□□ 1.29
HOMER3-204ENST00000539827 EXOC1LA0A1B0GW35 172 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 FAM92AA1XBS5 289 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 POC1B-GALNT4F8VUJ3 575 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 STK10O94804 968 aaKnown RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 TBX18O95935 607 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 RPL10AP62906 217 aaKnown RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 WASHC5Q12768 1159 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 RNF168Q8IYW5 571 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 CYP4X1Q8N118 509 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 ZNF689Q96CS4 500 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 CELF6Q96J87 481 aaKnown RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 FCRL2Q96LA5 508 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 STMN4Q9H169 189 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 SLC38A8A6NNN8 435 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 KCNU1A8MYU2 1149 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 E7EVH7 732 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 MDH1P40925 334 aaKnown RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 TBX4P57082 545 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 CAND1Q86VP6 1230 aaKnown RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 AGGF1Q8N302 714 aaeCLIP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 ATP11CQ8NB49 1132 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 SELENOSQ9BQE4 189 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 MAGED2Q9UNF1 606 aaPredicted RBP23.1■■□□□ 1.29
HOMER3-204ENST00000539827 NEU3Q9UQ49 428 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 RAD54BQ9Y620 910 aa23.1■■□□□ 1.29
HOMER3-204ENST00000539827 ERICH4A6NGS2 130 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 KCNK1O00180 336 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 RAG1P15918 1043 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 ATF6P18850 670 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 GCAP28676 217 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 SLC8B1Q6J4K2 584 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 C3orf62Q6ZUJ4 267 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 C14orf80Q86SX3 495 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 EXOC3L1Q86VI1 746 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 ZNF567Q8N184 647 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 MDM1Q8TC05 714 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 MRRFQ96E11 262 aaKnown RBP23.09■■□□□ 1.29
HOMER3-204ENST00000539827 ZNF558Q96NG5 402 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 FERMT1Q9BQL6 677 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 TLR8Q9NR97 1041 aaKnown RBP23.09■■□□□ 1.29
HOMER3-204ENST00000539827 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.09■■□□□ 1.29
HOMER3-204ENST00000539827 SLC12A6Q9UHW9 1150 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 TLR6Q9Y2C9 796 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 BACE2Q9Y5Z0 518 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 HS3ST4Q9Y661 456 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 LTBP2Q14767 1821 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 WDR5P61964 334 aaKnown RBP23.09■■□□□ 1.29
HOMER3-204ENST00000539827 SEMA5AQ13591 1074 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 SLC39A13Q96H72 371 aa23.09■■□□□ 1.29
HOMER3-204ENST00000539827 GREB1Q4ZG55 1949 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 TPSB2P20231 275 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 PHBP35232 272 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 SERPINB6P35237 376 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 FDFT1P37268 417 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 GALNT2Q10471 571 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 BTG3Q14201 252 aaPredicted RBP23.08■■□□□ 1.29
HOMER3-204ENST00000539827 TPSAB1Q15661 275 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 SLC39A11Q8N1S5 342 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 MCUQ8NE86 351 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 ARHGEF2Q92974 986 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms