RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PSMD3O43242 534 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 SOAT2O75908 522 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
VTN-202ENST00000539746 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
VTN-202ENST00000539746 RHOP08100 348 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 RBP3P10745 1247 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CES1P23141 567 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 NRIP1P48552 1158 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CDH4P55283 916 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CDK16Q00536 496 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 C2orf54Q08AI8 447 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 SEMA3BQ13214 749 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 SLC12A1Q13621 1099 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 PTK6Q13882 451 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 DPYSQ14117 519 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 PRPSAP1Q14558 356 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 SLC45A4Q5BKX6 768 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ATAT1Q5SQI0 421 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ARMC3Q5W041 872 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 EMBQ6PCB8 327 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 NUDT18Q6ZVK8 323 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CROCCP2Q86T23 111 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ATPAF2Q8N5M1 289 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
VTN-202ENST00000539746 PRELID2Q8N945 189 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ADAM32Q8TC27 787 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 SNF8Q96H20 258 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 RPRD1AQ96P16 312 aaPredicted RBP12.15□□□□□ -0.46
VTN-202ENST00000539746 PEBP4Q96S96 227 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 PHACTR1Q9C0D0 580 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 SIK2Q9H0K1 926 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ZNF576Q9H609 170 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CCSER2Q9H7U1 834 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ARFGAP3Q9NP61 516 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 ARHGEF4Q9NR80 690 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 CWC15Q9P013 229 aaKnown RBP12.15□□□□□ -0.46
VTN-202ENST00000539746 FAM50BQ9Y247 325 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 HEY1Q9Y5J3 304 aa12.15□□□□□ -0.46
VTN-202ENST00000539746 BRCA2P51587 3418 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 IGLV3-10A0A075B6K4 115 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 A0A1B0GVM2 712 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 TCAF2A6NFQ2 919 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 ERI2A8K979 691 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 GRXCR1A8MXD5 290 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 FANCGO15287 622 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 CCL16O15467 120 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 OPHN1O60890 802 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 LRIG2O94898 1065 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 MYOGP15173 224 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 GOT1P17174 413 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 CORO1AP31146 461 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 ADCY8P40145 1251 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 RENBPP51606 427 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 DYNLT1P63172 113 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 OTUD4Q01804 1114 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 NR1H3Q13133 447 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 RFTN1Q14699 578 aaPredicted RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 SLMAPQ14BN4 828 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 MPPE1Q53F39 396 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 GPR158Q5T848 1215 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 SH3PXD2AQ5TCZ1 1133 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 ZNF697Q5TEC3 545 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 HTR3DQ70Z44 454 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 HOOK3Q86VS8 718 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 JAMLQ86YT9 394 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 CMTM8Q8IZV2 173 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 CELF5Q8N6W0 485 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 SLC35B2Q8TB61 432 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 ACTL9Q8TC94 416 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 HNRNPLLQ8WVV9 542 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 CASKIN2Q8WXE0 1202 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 NDRG1Q92597 394 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 ZNF599Q96NL3 588 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 KCTD15Q96SI1 283 aaPredicted RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 DDX47Q9H0S4 455 aaKnown RBP12.14□□□□□ -0.47
VTN-202ENST00000539746 MAGEH1Q9H213 219 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 TDP1Q9NUW8 608 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 KLHL11Q9NVR0 708 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 TMEM248Q9NWD8 314 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 WHRNQ9P202 907 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
VTN-202ENST00000539746 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 PDE2AO00408 941 aaPredicted RBP12.13□□□□□ -0.47
VTN-202ENST00000539746 RAMP2O60895 175 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 KRT10P13645 584 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 ERCC2P18074 760 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 TACR2P21452 398 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 CA4P22748 312 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 FSHRP23945 695 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 CCNCP24863 283 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 DNAJB1P25685 340 aa12.13□□□□□ -0.47
VTN-202ENST00000539746 FDFT1P37268 417 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms