RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 TRABDQ9H4I3 376 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ARHGEF38Q9NXL2 777 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 COX16Q9P0S2 106 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 CACNG4Q9UBN1 327 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 ZC3H7BQ9UGR2 993 aaKnown RBP10.48□□□□□ -0.73
SPARC-209ENST00000539687 SCML2Q9UQR0 700 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 TRIM17Q9Y577 477 aa10.48□□□□□ -0.73
SPARC-209ENST00000539687 PATJQ8NI35 1801 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 RNF103O00237 685 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 ENPP3O14638 875 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 TM9SF1O15321 606 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 FAM155BO75949 473 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 DDHD2O94830 711 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 IBSPP21815 317 aaPredicted RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 FGFR3P22607 806 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 PRKCHP24723 683 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 RFC2P35250 354 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 MAGEA3P43357 314 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 GPX6P59796 221 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 RPL10AP62906 217 aaKnown RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 GALNT2Q10471 571 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 SLC10A2Q12908 348 aaPredicted RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 MRPL58Q14197 206 aaKnown RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 ITIH4Q14624 930 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 FASTKD3Q14CZ7 662 aaKnown RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 KCTD19Q17RG1 926 aaPredicted RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 CTXN3Q4LDR2 81 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 TIGD7Q6NT04 549 aaPredicted RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 HFE2Q6ZVN8 426 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 ANKS3Q6ZW76 656 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 SLC26A11Q86WA9 606 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 LRRC43Q8N309 656 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 COLGALT1Q8NBJ5 622 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 GSDMBQ8TAX9 411 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 HASPINQ8TF76 798 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 NDRG1Q92597 394 aaKnown RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 TBC1D31Q96DN5 1066 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 P2RY11Q96G91 374 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 MAGEB18Q96M61 343 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 PAFAH2Q99487 392 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 ADAM33Q9BZ11 813 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 RETREG1Q9H6L5 497 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 C10orf88Q9H8K7 445 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 PAK6Q9NQU5 681 aaPredicted RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 CLIC5Q9NZA1 410 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 KLHL8Q9P2G9 620 aaPredicted RBP10.47□□□□□ -0.73
SPARC-209ENST00000539687 OR12D3Q9UGF7 316 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 OGDHLQ9ULD0 1010 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 CHMP2BQ9UQN3 213 aa10.47□□□□□ -0.73
SPARC-209ENST00000539687 TCRBV7S3A2A0A539 114 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TCRBV9S1A1TA0A576 114 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 MAGEB16A2A368 324 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 SDR42E2A6NKP2 422 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TNFRSF10BO14763 440 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 KRT38O76015 456 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 APOEP02649 317 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 CXCL10P02778 98 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 SRGAP2BP0DMP2 458 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 EPHB2P29323 1055 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 SSTR1P30872 391 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 HOXC13P31276 330 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 CACNA2D1P54289 1103 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 DNAJC3Q13217 504 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 EIF4EBP2Q13542 120 aaPredicted RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 ANO4Q32M45 955 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TTC39BQ5VTQ0 682 aaPredicted RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 RGS9BPQ6ZS82 235 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 ANKRD33Q7Z3H0 272 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 LINC00523Q86TU6 105 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 LRRTM3Q86VH5 581 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TAX1BP1Q86VP1 789 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 ZNF280BQ86YH2 543 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 SCN4BQ8IWT1 228 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 PYROXD2Q8N2H3 581 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 CCDC197Q8NCU1 140 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 DBF4BQ8NFT6 615 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 MDM1Q8TC05 714 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 SLC44A1Q8WWI5 657 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 CKAP2Q8WWK9 683 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 STAMBPL1Q96FJ0 436 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 CABS1Q96KC9 395 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 SPATA17Q96L03 361 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 C1orf74Q96LT6 269 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TOX2Q96NM4 488 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 ZNF317Q96PQ6 595 aaPredicted RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 EBNA1BP2Q99848 306 aaKnown RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 PRMT1Q99873 361 aaKnown RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 OSBPL7Q9BZF2 842 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TMLHEQ9NVH6 421 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 HAUS2Q9NVX0 235 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 ABI2Q9NYB9 513 aaPredicted RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 HSFX1Q9UBD0 423 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 CTNNAL1Q9UBT7 734 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TBK1Q9UHD2 729 aa10.46□□□□□ -0.73
SPARC-209ENST00000539687 TLR6Q9Y2C9 796 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms