RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 FBXL6Q8N531 539 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 ARFGAP1Q8N6T3 406 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 HJURPQ8NCD3 748 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 EZH1Q92800 747 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 IGSF8Q969P0 613 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 HAPLN3Q96S86 360 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 NELL2Q99435 816 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 LMAN1LQ9HAT1 526 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 OSGEPQ9NPF4 335 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 RBM12Q9NTZ6 932 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 DNAJC17Q9NVM6 304 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 DEC1Q9P2X7 70 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 UVRAGQ9P2Y5 699 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 FBXO10Q9UK96 956 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 INTUQ9ULD6 942 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 TFR2Q9UP52 801 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 REXO2Q9Y3B8 237 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 SIT1Q9Y3P8 196 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 TTC28Q96AY4 2481 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 ANTXRLA6NF34 631 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 PRR33A8MZF0 331 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 RNF8O76064 485 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 APODP05090 189 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 DCNP07585 359 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 CHRNB1P11230 501 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 AOC1P19801 751 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 DGKGP49619 791 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 IRAK1P51617 712 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 CLCN5P51795 746 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 GRSF1Q12849 480 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 ARL13BQ3SXY8 428 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 GRAMD4Q6IC98 578 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 FBXL22Q6P050 247 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 SLFN11Q7Z7L1 901 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 CIR1Q86X95 450 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 SFTPA1Q8IWL2 248 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 ZNF683Q8IZ20 524 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 ACRBPQ8NEB7 543 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 WFDC5Q8TCV5 224 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 EXOC4Q96A65 974 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 OSBPL6Q9BZF3 934 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 IP6K2Q9UHH9 426 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 FZD10Q9ULW2 581 aa13.14□□□□□ -0.31
TSPAN9-207ENST00000539631 ATG2BQ96BY7 2078 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 TYW5A2RUC4 315 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 K7EQS6 105 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 MYO1FO00160 1098 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 LRCH4O75427 683 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 KAT7O95251 611 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 DRD1P21728 446 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 MIPP30301 263 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 CCINQ13939 588 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 ACAP1Q15027 740 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 C5orf22Q49AR2 442 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 RABGAP1LQ5R372 815 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 MPP7Q5T2T1 576 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 ARTNQ5T4W7 220 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 CPNE8Q86YQ8 564 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 SUGP1Q8IWZ8 645 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 CARNMT1Q8N4J0 409 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 NIPA2Q8N8Q9 360 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 PEBP4Q96S96 227 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 LRFN3Q9BTN0 628 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 DLGAP2Q9P1A6 1054 aa13.13□□□□□ -0.31
TSPAN9-207ENST00000539631 RCCD1A6NED2 376 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 E9PAM4 449 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 FAM72CH0Y354 149 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 NCAM2O15394 837 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 CNTN5O94779 1100 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 IPO7O95373 1038 aaKnown RBP13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 TCF4P15884 667 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 AVPR2P30518 371 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 GRIA2P42262 883 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 SEC13P55735 322 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 SCAPQ12770 1279 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 LRRC32Q14392 662 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 MESDQ14696 234 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 GEN1Q17RS7 908 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 EFHC2Q5JST6 749 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 DGKKQ5KSL6 1271 aa13.12□□□□□ -0.31
TSPAN9-207ENST00000539631 FAM72AQ5TYM5 149 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms