RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SLC10A2Q12908 348 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-209ENST00000539584 CCNIQ14094 377 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 LY6KQ17RY6 165 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 CNPY1Q3B7I2 92 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 CFAP157Q5JU67 520 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 CASC4Q6P4E1 433 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 LCA5Q86VQ0 697 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 MICALL2Q8IY33 904 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 PIWIL1Q96J94 861 aaKnown RBP13.62□□□□□ -0.23
UBE3B-209ENST00000539584 EBF3Q9H4W6 596 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 DHX35Q9H5Z1 703 aaKnown RBP13.62□□□□□ -0.23
UBE3B-209ENST00000539584 GPATCH2LQ9NWQ4 482 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 DTLQ9NZJ0 730 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 VPS28Q9UK41 221 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 EP400Q96L91 3159 aa13.62□□□□□ -0.23
UBE3B-209ENST00000539584 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-209ENST00000539584 APOA4P06727 396 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 CPA3P15088 417 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 KCNA4P22459 653 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 HADHAP40939 763 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 NUMBP49757 651 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 INHBEP58166 350 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 AMHR2Q16671 573 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 MMEL1Q495T6 779 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 ANKRD20A4Q4UJ75 823 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 RAB6CQ53S08 254 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 PPP1R26Q5T8A7 1209 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-209ENST00000539584 EPGNQ6UW88 154 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 C10orf107Q8IVU9 208 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 ARNTL2Q8WYA1 636 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 CNDP1Q96KN2 507 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 LBHD1Q9BQE6 289 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-209ENST00000539584 RAB6CQ9H0N0 254 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 PDZD7Q9H5P4 517 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 DENRO43583 198 aaKnown RBP13.61□□□□□ -0.23
UBE3B-209ENST00000539584 RNASEH1O60930 286 aaKnown RBP13.61□□□□□ -0.23
UBE3B-209ENST00000539584 THRAP10827 490 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 ITGAXP20702 1163 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 HSPA1LP34931 641 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 SERPINB8P50452 374 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 CHN2P52757 468 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 NCBP2-AS2Q69YL0 99 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 C16orf89Q6UX73 402 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 DENND5BQ6ZUT9 1274 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 TTC30AQ86WT1 665 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 COLGALT1Q8NBJ5 622 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 PYDC1Q8WXC3 89 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 CDH19Q9H159 772 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 MINDY3Q9H8M7 445 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 MRGBPQ9NV56 204 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 MTMR10Q9NXD2 777 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 PLK2Q9NYY3 685 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 ERAP1Q9NZ08 941 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 GGA3Q9NZ52 723 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 IGSF9Q9P2J2 1179 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 PSMD13Q9UNM6 376 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 RAD54BQ9Y620 910 aa13.61□□□□□ -0.23
UBE3B-209ENST00000539584 MEI4A8MW99 385 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 LYPLA1O75608 230 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SLC25A27O95847 323 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 COX4I1P13073 169 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 DNAJB1P25685 340 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SERPINB6P35237 376 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 RGS7P49802 495 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 RPS6KA3P51812 740 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 TBL3Q12788 808 aaKnown RBP13.6□□□□□ -0.23
UBE3B-209ENST00000539584 PRKG1Q13976 671 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 MAP7Q14244 749 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 PDK1Q15118 436 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 OGFRL1Q5TC84 451 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-209ENST00000539584 C16orf46Q6P387 395 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 MAVSQ7Z434 540 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SCUBE3Q8IX30 993 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 ALDH16A1Q8IZ83 802 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 MARVELD2Q8N4S9 558 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SLC25A41Q8N5S1 370 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 RDH11Q8TC12 318 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 CERS2Q96G23 380 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 CLMNQ96JQ2 1002 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 HSFY1Q96LI6 401 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 DDX50Q9BQ39 737 aaKnown RBP13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SPATC1LQ9H0A9 340 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 LRRC40Q9H9A6 602 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 ADAMTS6Q9UKP5 1117 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 USP3Q9Y6I4 520 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 SCN4AP35499 1836 aa13.6□□□□□ -0.23
UBE3B-209ENST00000539584 MAGEB16A2A368 324 aa13.59□□□□□ -0.23
UBE3B-209ENST00000539584 SLCO1B7G3V0H7 640 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms