RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PLK2Q9NYY3 685 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 RHODO00212 210 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 KAT7O95251 611 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 SLC5A2P31639 672 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 RFX2P48378 723 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 ARHGAP15Q53QZ3 475 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.83□□□□□ -1.48
CCDC7-209ENST00000539197 KIAA1755Q5JYT7 1200 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 C9orf50Q5SZB4 431 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 DNASE2BQ8WZ79 361 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 KAT2AQ92830 837 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 CLMNQ96JQ2 1002 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 ZNF347Q96SE7 839 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 EIF3CQ99613 913 aaKnown RBP5.83□□□□□ -1.48
CCDC7-209ENST00000539197 PNPLA8Q9NP80 782 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 ZMYND8Q9ULU4 1186 aaPredicted RBP5.83□□□□□ -1.48
CCDC7-209ENST00000539197 MYO6Q9UM54 1294 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 SLC8A2Q9UPR5 921 aa5.83□□□□□ -1.48
CCDC7-209ENST00000539197 TSPAN6O43657 245 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 PECAM1P16284 738 aaPredicted RBP5.82□□□□□ -1.48
CCDC7-209ENST00000539197 PIK3CBP42338 1070 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 SLC4A8Q2Y0W8 1093 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 P3H1Q32P28 736 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 INO80DQ53TQ3 878 aaPredicted RBP5.82□□□□□ -1.48
CCDC7-209ENST00000539197 NADSYN1Q6IA69 706 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 MRNIPQ6NTE8 343 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 NR2C2APQ86WQ0 139 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 ATP11CQ8NB49 1132 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 JDP2Q8WYK2 163 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 TSR2Q969E8 191 aaKnown RBP5.82□□□□□ -1.48
CCDC7-209ENST00000539197 NUP62CLQ9H1M0 184 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 MAP6D1Q9H9H5 199 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 SPAG4Q9NPE6 437 aa5.82□□□□□ -1.48
CCDC7-209ENST00000539197 SIRT3Q9NTG7 399 aaPredicted RBP5.82□□□□□ -1.48
CCDC7-209ENST00000539197 AREL1O15033 823 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 MDM4O15151 490 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 KCNQ3O43525 872 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 PAPSS2O95340 614 aaPredicted RBP5.81□□□□□ -1.48
CCDC7-209ENST00000539197 USP17L6PQ6QN14 398 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 C14orf80Q86SX3 495 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 RBM23Q86U06 439 aaKnown RBP5.81□□□□□ -1.48
CCDC7-209ENST00000539197 MORC1Q86VD1 984 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 TIFAQ96CG3 184 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 PCDHAC1Q9H158 963 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.81□□□□□ -1.48
CCDC7-209ENST00000539197 OBP2AQ9NY56 170 aa5.81□□□□□ -1.48
CCDC7-209ENST00000539197 RHPN2P1A8MT19 583 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 KPNA5O15131 536 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 PPP6R2O75170 966 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 HOXC6P09630 235 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 FGFR2P21802 821 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 RRP1P56182 461 aaKnown RBP5.8□□□□□ -1.48
CCDC7-209ENST00000539197 RPL36AP83881 106 aaKnown RBP5.8□□□□□ -1.48
CCDC7-209ENST00000539197 ZNF543Q08ER8 600 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 WASHC2DQ5SRD0 308 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 CUZD1Q86UP6 607 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 CCDC150Q8NCX0 1101 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 SLITRK1Q96PX8 696 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 ABHD14AQ9BUJ0 271 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 MAGEB5Q9BZ81 275 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 ISCUQ9H1K1 167 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 PRDM16Q9HAZ2 1276 aa5.8□□□□□ -1.48
CCDC7-209ENST00000539197 POM121BA6NF01 834 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 CLCA1A8K7I4 914 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 ERVV-2B6SEH9 535 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 PODXLO00592 558 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 NDST3O95803 873 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 S100BP04271 92 aaPredicted RBP5.79□□□□□ -1.48
CCDC7-209ENST00000539197 PEPDP12955 493 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 CPA1P15085 419 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 GAS1P54826 345 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 DSCR9P59020 149 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 ROR2Q01974 943 aaKnown RBP5.79□□□□□ -1.48
CCDC7-209ENST00000539197 ATP1A4Q13733 1029 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 CBFBQ13951 182 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 DGKKQ5KSL6 1271 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 TTC39AQ5SRH9 613 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 PARM1Q6UWI2 310 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 RNF152Q8N8N0 203 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 C7orf57Q8NEG2 295 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 OR52N4Q8NGI2 321 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 LMO3Q8TAP4 145 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 NR4A3Q92570 626 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 GRAMD1AQ96CP6 724 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 PHF21BQ96EK2 531 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 SEZ6LQ9BYH1 1024 aa5.79□□□□□ -1.48
CCDC7-209ENST00000539197 G3BP2Q9UN86 482 aaKnown RBP5.79□□□□□ -1.48
CCDC7-209ENST00000539197 A0A087WYN8 130 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 BECN2A8MW95 431 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 IGKV3-20P01619 116 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 GABRB3P28472 473 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 SLC37A1P57057 533 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 CYB5R4Q7L1T6 521 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 NPIPB3Q92617 1050 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 MAGEH1Q9H213 219 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 IL21RQ9HBE5 538 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 FSCN3Q9NQT6 498 aa5.78□□□□□ -1.48
CCDC7-209ENST00000539197 A0A1B0GVT2 93 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms