RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 L2HGDHQ9H9P8 463 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SMYD2Q9NRG4 433 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PCDHB16Q9NRJ7 776 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SERTAD4Q9NUC0 356 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PARPBPQ9NWS1 579 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FLRT1Q9NZU1 646 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NKX1-2Q9UD57 310 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HSF4Q9ULV5 492 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 OAZ3Q9UMX2 235 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CDY1Q9Y6F8 540 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 C17orf102A2RUQ5 167 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SLC30A4O14863 429 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DOK2O60496 412 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NCR1O76036 304 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GFPT2O94808 682 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 LATS1O95835 1130 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PDGFBP01127 241 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ITGA2BP08514 1039 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SCG2P13521 617 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GLULP15104 373 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FGFR4P22455 802 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 LIPAP38571 399 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PBX1P40424 430 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PPM1FP49593 454 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 KRTAP10-2P60368 255 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 RPL7AP62424 266 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 AP2B1P63010 937 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HHEXQ03014 270 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PRKCZQ05513 592 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MTAPQ13126 283 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 BIRC3Q13489 604 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 BMPR2Q13873 1038 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TRIM29Q14134 588 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DLG2Q15700 870 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GPR162Q16538 588 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CYP1B1Q16678 543 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FBXO43Q4G163 708 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CTXN3Q4LDR2 81 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CBWD5Q5RIA9 395 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC30Q5VVM6 783 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 WDR93Q6P2C0 686 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CYP20A1Q6UW02 462 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TMTC3Q6ZXV5 915 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SYT13Q7L8C5 426 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PLD5Q8N7P1 536 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MCPH1Q8NEM0 835 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 U2AF1L4Q8WU68 220 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 LPIN2Q92539 896 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CTHRC1Q96CG8 243 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PBKQ96KB5 322 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 OR14A2Q96R54 314 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PIGSQ96S52 555 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CHCHD6Q9BRQ6 235 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 EPC1Q9H2F5 836 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PLEKHA5Q9HAU0 1116 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PREBQ9HCU5 417 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 KLC4Q9NSK0 619 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SIRT3Q9NTG7 399 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MPP6Q9NZW5 540 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SLC17A6Q9P2U8 582 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 COPG2Q9UBF2 871 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SLC25A10Q9UBX3 287 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 RIMKLBQ9ULI2 386 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SMG5Q9UPR3 1016 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DNAJC16Q9Y2G8 782 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 USP15Q9Y4E8 981 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 IRAK3Q9Y616 596 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PIAS3Q9Y6X2 628 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SCO2A0A1W2PP80 73 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CLEC18AA5D8T8 446 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 UNC119BA6NIH7 251 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TTC34A8MYJ7 566 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NPHP1O15259 732 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SRGAP2O75044 1071 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 COQ9O75208 318 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 WDR47O94967 919 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PGM3O95394 542 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ESRRBO95718 433 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HNRNPA1P09651 372 aaKnown RBP eCLIP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 C1SP09871 688 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 IFIT1P09914 478 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NHLRC4P0CG21 123 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FPR3P25089 353 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PTGS2P35354 604 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GPR12P47775 334 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PCP4P48539 62 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ELLP55199 621 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CFHR3Q02985 330 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 EGR4Q05215 589 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GAB1Q13480 694 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 KIF19Q2TAC6 998 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FAM174BQ3ZCQ3 159 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CRY2Q49AN0 593 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 COLEC12Q5KU26 742 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ATXN7L2Q5T6C5 722 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FAXCQ5TGI0 409 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ACSM6Q6P461 480 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 VSTM1Q6UX27 236 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SYNE3Q6ZMZ3 975 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms