RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 TMEM120BA0PK00 339 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 RASA4BC9J798 803 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 RASA4O43374 803 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 BRAFP15056 766 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 MX2P20592 715 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 HTR7P34969 479 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 PGFP49763 221 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 SARNPP82979 210 aaKnown RBP21.01■□□□□ 0.95
DDX55-205ENST00000538744 CDK16Q00536 496 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 TLE2Q04725 743 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 SMARCB1Q12824 385 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 PPP2R5DQ14738 602 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 TRIM60Q495X7 471 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 DEFB128Q7Z7B8 93 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 ATAD1Q8NBU5 361 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 SPPL2BQ8TCT7 592 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 SERPINB11Q96P15 392 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 SFMBT1Q9UHJ3 866 aa21.01■□□□□ 0.95
DDX55-205ENST00000538744 NT5C1B-RDH14C9J2C7 533 aa21■□□□□ 0.95
DDX55-205ENST00000538744 FAM107AO95990 144 aa21■□□□□ 0.95
DDX55-205ENST00000538744 CREB1P16220 341 aa21■□□□□ 0.95
DDX55-205ENST00000538744 MAGEA3P43357 314 aa21■□□□□ 0.95
DDX55-205ENST00000538744 ARPP19P56211 112 aa21■□□□□ 0.95
DDX55-205ENST00000538744 PPIDQ08752 370 aaKnown RBP21■□□□□ 0.95
DDX55-205ENST00000538744 WASHC5Q12768 1159 aa21■□□□□ 0.95
DDX55-205ENST00000538744 GPR17Q13304 367 aa21■□□□□ 0.95
DDX55-205ENST00000538744 MSANTD2Q6P1R3 559 aa21■□□□□ 0.95
DDX55-205ENST00000538744 FOXR1Q6PIV2 292 aa21■□□□□ 0.95
DDX55-205ENST00000538744 ANKS3Q6ZW76 656 aa21■□□□□ 0.95
DDX55-205ENST00000538744 TRABD2AQ86V40 505 aa21■□□□□ 0.95
DDX55-205ENST00000538744 TP53INP2Q8IXH6 220 aa21■□□□□ 0.95
DDX55-205ENST00000538744 NPWQ8N729 165 aa21■□□□□ 0.95
DDX55-205ENST00000538744 CCT8L2Q96SF2 557 aa21■□□□□ 0.95
DDX55-205ENST00000538744 CYTH2Q99418 400 aa21■□□□□ 0.95
DDX55-205ENST00000538744 KCNK9Q9NPC2 374 aa21■□□□□ 0.95
DDX55-205ENST00000538744 EIF2B3Q9NR50 452 aaKnown RBP21■□□□□ 0.95
DDX55-205ENST00000538744 IL37Q9NZH6 218 aa21■□□□□ 0.95
DDX55-205ENST00000538744 SENP1Q9P0U3 644 aa21■□□□□ 0.95
DDX55-205ENST00000538744 MTMR11A4FU01 709 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 FOXO6A8MYZ6 492 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 MTSS1O43312 755 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 MSI1O43347 362 aaKnown RBP20.99■□□□□ 0.95
DDX55-205ENST00000538744 TBC1D4O60343 1298 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 RTN3O95197 1032 aaPredicted RBP20.99■□□□□ 0.95
DDX55-205ENST00000538744 MNX1P50219 401 aaPredicted RBP20.99■□□□□ 0.95
DDX55-205ENST00000538744 GALNT2Q10471 571 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 EFTUD2Q15029 972 aaKnown RBP eCLIP20.99■□□□□ 0.952e-11■■■■■ 32.6
DDX55-205ENST00000538744 PARP6Q2NL67 630 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 RTP2Q5QGT7 225 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 ZNF534Q76KX8 674 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 AGGF1Q8N302 714 aaeCLIP20.99■□□□□ 0.95
DDX55-205ENST00000538744 TTC9BQ8N6N2 239 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 STKLD1Q8NE28 680 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 HDAC11Q96DB2 347 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 CFAP36Q96G28 342 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 TTPALQ9BTX7 342 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 DHRS4Q9BTZ2 278 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 CRISPLD2Q9H0B8 497 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 SIK2Q9H0K1 926 aa20.99■□□□□ 0.95
DDX55-205ENST00000538744 PAGE1O75459 146 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 CPP00450 1065 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 GSTA2P09210 222 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 KRT15P19012 456 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 STX2P32856 288 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 PBX3P40426 434 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 CCT5P48643 541 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 ZNF567Q8N184 647 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 ZNF473Q8WTR7 871 aaKnown RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 C2orf15Q8WU43 125 aaKnown RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 MRRFQ96E11 262 aaKnown RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 PAFAH2Q99487 392 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 OSER1Q9NX31 292 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 GMIPQ9P107 970 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 IGSF9Q9P2J2 1179 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 ZC3H7BQ9UGR2 993 aaKnown RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 GREB1Q4ZG55 1949 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 TCRBV9S1A1TA0A576 114 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 MLNP12872 115 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 YWHAQP27348 245 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 MSH2P43246 934 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 USP46P62068 366 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 PKN2Q16513 984 aaKnown RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 C1orf53Q5VUE5 145 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 RWDD4Q6NW29 188 aaKnown RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 ADGRD1Q6QNK2 874 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 TMEM173Q86WV6 379 aaPredicted RBP20.98■□□□□ 0.95
DDX55-205ENST00000538744 CEP41Q9BYV8 373 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 CCDC134Q9H6E4 229 aa20.98■□□□□ 0.95
DDX55-205ENST00000538744 BRCA2P51587 3418 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 FAM92AA1XBS5 289 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 FGF10O15520 208 aaPredicted RBP20.97■□□□□ 0.95
DDX55-205ENST00000538744 SRGAP2BP0DMP2 458 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 PTPN3P26045 913 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 PSMB4P28070 264 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 HOXC13P31276 330 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 GARSP41250 739 aaKnown RBP20.97■□□□□ 0.95
DDX55-205ENST00000538744 COG7P83436 770 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 IKBKEQ14164 716 aa20.97■□□□□ 0.95
DDX55-205ENST00000538744 MANEALQ5VSG8 457 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms