RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NUF2Q9BZD4 464 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 OSBPL6Q9BZF3 934 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 XPNPEP3Q9NQH7 507 aa19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 SEPT9Q9UHD8 586 aaPredicted RBP19.08■□□□□ 0.64
SFSWAP-207ENST00000538548 TBC1D12O60347 775 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 CBFA2T3O75081 653 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 ALDH1A2O94788 518 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 H6PDO95479 791 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TPSB2P20231 275 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 MX2P20592 715 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 PIK3R1P27986 724 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 SERPINB5P36952 375 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 FKBP1AP62942 108 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 MTA1Q13330 715 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 PDAP1Q13442 181 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TPSAB1Q15661 275 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 STRIP1Q5VSL9 837 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 SNX32Q86XE0 403 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TMEM102Q8N9M5 508 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 PDCD6IPQ8WUM4 868 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 ADGRA2Q96PE1 1338 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 LIN28AQ9H9Z2 209 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TUBGCP4Q9UGJ1 667 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TESPA1A2RU30 521 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 BCAS2O75934 225 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF26P17031 533 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TGM2P21980 687 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TGFB2P61812 414 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 WDR49Q8IV35 697 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TMIGD2Q96BF3 282 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TARS2Q9BW92 718 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 RNPEPQ9H4A4 650 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 TCF7L2Q9NQB0 619 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 RNF11Q9Y3C5 154 aa19.07■□□□□ 0.64
SFSWAP-207ENST00000538548 BOLA2-SMG1P6H3BVE0 249 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 ERBB2P04626 1255 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 CD19P15391 556 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 ADORA2AP29274 412 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 STT3AP46977 705 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 ACADVLP49748 655 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 MS4A2Q01362 244 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 DACT2Q5SW24 774 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 STEAP4Q687X5 459 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 CYP4V2Q6ZWL3 525 aaPredicted RBP19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF781Q8N8C0 355 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 RP9Q8TA86 221 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 CDKL2Q92772 493 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 TMEM216Q9P0N5 145 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 FBXO40Q9UH90 709 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 HEY1Q9Y5J3 304 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 HEMK1Q9Y5R4 338 aaPredicted RBP19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 NR2E3Q9Y5X4 410 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 KANSL1LA0AUZ9 987 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 K7ERI5 159 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 MED7O43513 233 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 CAP2P40123 477 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 BCAR1P56945 870 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 TUBA4AP68366 448 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 NIPAL4Q0D2K0 466 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 CEACAM7Q14002 265 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 PPP2R5DQ14738 602 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 MAP3K20Q9NYL2 800 aaKnown RBP19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 EPS15L1Q9UBC2 864 aa19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 BARX2Q9UMQ3 279 aaPredicted RBP19.06■□□□□ 0.64
SFSWAP-207ENST00000538548 HSPA4LO95757 839 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 ME2P23368 584 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 ENTPD1P49961 510 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 RAB15P59190 212 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 MPP3Q13368 585 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 SEZ6Q53EL9 994 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 SCARA5Q6ZMJ2 495 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 BRSK2Q8IWQ3 736 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 PGAM4Q8N0Y7 254 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 EME1Q96AY2 570 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 VPS50Q96JG6 964 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 OR52B2Q96RD2 323 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 PDCD2LQ9BRP1 358 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 MTMR12Q9C0I1 747 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 APOL1O14791 398 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 ADCY6O43306 1168 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 METTL18O95568 372 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 MSX2P35548 267 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF143P52747 638 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 RPS6P62753 249 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 DPYSQ14117 519 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 SWSAP1Q6NVH7 229 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 SETD3Q86TU7 594 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 UNC5BQ8IZJ1 945 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 MAPK15Q8TD08 544 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 MCRS1Q96EZ8 462 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF597Q96LX8 424 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 RANBP9Q96S59 729 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 OSBPL11Q9BXB4 747 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 IGSF9Q9P2J2 1179 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC17A6Q9P2U8 582 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 MYRFQ9Y2G1 1151 aa19.05■□□□□ 0.64
SFSWAP-207ENST00000538548 ARHGEF37A1IGU5 675 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 HMGCRP04035 888 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PHKA2P46019 1235 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PKNOX1P55347 436 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms