RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 DPYSQ14117 519 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 PPP2R5EQ16537 467 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 WHAMMP3Q1A5X7 153 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 FAM78AQ5JUQ0 283 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 ATAT1Q5SQI0 421 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 Q6ZNB5 142 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 CHSY1Q86X52 802 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 UNC45BQ8IWX7 931 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 CCDC33Q8N5R6 958 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 IGSF8Q969P0 613 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 PRICKLE1Q96MT3 831 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 MYADMQ96S97 322 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 POMKQ9H5K3 350 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 ARHGEF4Q9NR80 690 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 TDP1Q9NUW8 608 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 MPP6Q9NZW5 540 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 H3BRJ5 948 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 CST8O60676 142 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 MAP3K6O95382 1288 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 FOSL2P15408 326 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 PECAM1P16284 738 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 PFKLP17858 780 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 TACR2P21452 398 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 PTPN7P35236 360 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 ARL4AP40617 200 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 TPI1P60174 286 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 COPS2P61201 443 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 CES5AQ6NT32 575 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 RWDD4Q6NW29 188 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 FBXL22Q6P050 247 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 MAP7D3Q8IWC1 876 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 BBS7Q8IWZ6 715 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 CFAP52Q8N1V2 620 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 SMRP1Q8NCR6 262 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 ATG4AQ8WYN0 398 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC12A6Q9UHW9 1150 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 TTC7AQ9ULT0 858 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 PRUNE2Q8WUY3 3088 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 TSPAN3O60637 253 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 CNTN5O94779 1100 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 KCNA5P22460 613 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 SP100P23497 879 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 EPHB2P29323 1055 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC11A2P49281 568 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 SKIV2LQ15477 1246 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 ALFQ53S48 1182 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 NCBP2-AS2Q69YL0 99 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 C1orf228Q6PIY5 440 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 B4GALNT4Q76KP1 1039 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 TP53INP2Q8IXH6 220 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 LGI2Q8N0V4 545 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 PLD5Q8N7P1 536 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 LRRN4Q8WUT4 740 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 C1orf54Q8WWF1 131 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 C1orf74Q96LT6 269 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 EPAS1Q99814 870 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 USP15Q9Y4E8 981 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 HELZP42694 1942 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
SFSWAP-206ENST00000537582 BRWD1Q9NSI6 2320 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 GRXCR2A6NFK2 248 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 KRIT1O00522 736 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 RIOK3O14730 519 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 ERCC2P18074 760 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 PAFAH1B1P43034 410 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 GBE1Q04446 702 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 ZNF77Q15935 545 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 FAM182AQ5T1J6 154 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC9A4Q6AI14 798 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 BBS12Q6ZW61 710 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 NPWQ8N729 165 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 PRELID2Q8N945 189 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 TBC1D31Q96DN5 1066 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 ASB16Q96NS5 453 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 MAK16Q9BXY0 300 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 NDFIP2Q9NV92 336 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 RCOR3Q9P2K3 495 aaPredicted RBP16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 CD207Q9UJ71 328 aa16.15■□□□□ 0.18
SFSWAP-206ENST00000537582 APOL1O14791 398 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 DCLK1O15075 740 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 DAPK3O43293 454 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 MFSD11O43934 449 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 TJP3O95049 919 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 FCARP24071 287 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 HOXC13P31276 330 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 CETN2P41208 172 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 RPS24P62847 133 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 MRPS25P82663 173 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 NRG1Q02297 640 aaPredicted RBP16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 SLC10A2Q12908 348 aaPredicted RBP16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 USP4Q13107 963 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 TUBB2AQ13885 445 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 ADGRF1Q5T601 910 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 HTR3DQ70Z44 454 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 TFAP2DQ7Z6R9 452 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 SPATA4Q8NEY3 305 aa16.14■□□□□ 0.17
SFSWAP-206ENST00000537582 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms