RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RASSF9O75901 435 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CABYRO75952 493 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 PSMB4P28070 264 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CXCR3P49682 368 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 TSPY1Q01534 308 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 ITGA7Q13683 1181 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
MKS1-204ENST00000537529 OVOS1Q6IE37 1185 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 ZNF567Q8N184 647 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 PDCD7Q8N8D1 485 aaKnown RBP16.12■□□□□ 0.17
MKS1-204ENST00000537529 NETO2Q8NC67 525 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 DEPDC1BQ8WUY9 529 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 PKMYT1Q99640 499 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 WDCPQ9H6R7 721 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 ANLNQ9NQW6 1124 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 SMYD2Q9NRG4 433 aa16.12■□□□□ 0.17
MKS1-204ENST00000537529 MTSS1O43312 755 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 DHRS4L1P0CG22 281 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 CSH1P0DML2 217 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 CSH2P0DML3 217 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 MX2P20592 715 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 ALDH3A1P30838 453 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 BSPRYQ5W0U4 402 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 CASC4Q6P4E1 433 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 TRMT10BQ6PF06 316 aaKnown RBP16.11■□□□□ 0.17
MKS1-204ENST00000537529 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
MKS1-204ENST00000537529 CTU1Q7Z7A3 348 aaKnown RBP16.11■□□□□ 0.17
MKS1-204ENST00000537529 HASPINQ8TF76 798 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 SUSD3Q96L08 255 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 NAT9Q9BTE0 207 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 ECT2Q9H8V3 914 aa16.11■□□□□ 0.17
MKS1-204ENST00000537529 TRMT13Q9NUP7 481 aaKnown RBP16.11■□□□□ 0.17
MKS1-204ENST00000537529 KLHL8Q9P2G9 620 aaPredicted RBP16.11■□□□□ 0.17
MKS1-204ENST00000537529 WDR27A2RRH5 827 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 WDR91A4D1P6 747 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 INPPL1O15357 1258 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 TROVE2P10155 538 aaKnown RBP eCLIP16.1■□□□□ 0.17
MKS1-204ENST00000537529 ELNP15502 786 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 PGAM1P18669 254 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 TYMPP19971 482 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 CNTFP26441 200 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 SERPINB6P35237 376 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 CCNFP41002 786 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 PPIDQ08752 370 aaKnown RBP16.1■□□□□ 0.17
MKS1-204ENST00000537529 MGAT5Q09328 741 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 BNIP1Q12981 228 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 SETDB1Q15047 1291 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 OTOAQ7RTW8 1153 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 TAC4Q86UU9 113 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 FITM2Q8N6M3 262 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 SMC1BQ8NDV3 1235 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 OR10T2Q8NGX3 314 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 HHIPL1Q96JK4 782 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 FAM111AQ96PZ2 611 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 CEP41Q9BYV8 373 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 MANSC1Q9H8J5 431 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 MKS1Q9NXB0 559 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 TMEM88BA6NKF7 163 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 I6L893 689 aaPredicted RBP16.1■□□□□ 0.17
MKS1-204ENST00000537529 DCTN3O75935 186 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 HNRNPH1P31943 449 aaKnown RBP16.1■□□□□ 0.17
MKS1-204ENST00000537529 ETV4P43268 484 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 NAB1Q13506 487 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 BEND5Q7L4P6 421 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 PID1Q7Z2X4 250 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 RNF180Q86T96 592 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 ZNF598Q86UK7 904 aaKnown RBP16.1■□□□□ 0.17
MKS1-204ENST00000537529 ZNF276Q8N554 614 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 CDKL2Q92772 493 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 SRPK1Q96SB4 655 aaKnown RBP16.1■□□□□ 0.17
MKS1-204ENST00000537529 TKTL2Q9H0I9 626 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 C12orf65Q9H3J6 166 aaKnown RBP16.1■□□□□ 0.17
MKS1-204ENST00000537529 MOCS1Q9NZB8 636 aa16.1■□□□□ 0.17
MKS1-204ENST00000537529 COL4A4P53420 1690 aaPredicted RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 UGT1A9O60656 530 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 ALDH1A2O94788 518 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 YY1P25490 414 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 PTPN3P26045 913 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 MGAT1P26572 445 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 SESN2P58004 480 aaPredicted RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 NCALDP61601 193 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 C4orf50Q6ZRC1 276 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 MARK2Q7KZI7 788 aaKnown RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 ZNF398Q8TD17 642 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 DQX1Q8TE96 717 aaKnown RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 RNF34Q969K3 372 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 TTC17Q96AE7 1141 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 TRIM56Q9BRZ2 755 aaKnown RBP16.09■□□□□ 0.17
MKS1-204ENST00000537529 UGT1A7Q9HAW7 530 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 UGT1A10Q9HAW8 530 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 UGT1A8Q9HAW9 530 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 KLC4Q9NSK0 619 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 OR12D3Q9UGF7 316 aa16.09■□□□□ 0.17
MKS1-204ENST00000537529 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms