RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TNK2Q07912 1038 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 CCNG2Q16589 344 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 PKDCCQ504Y2 493 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 SPOCD1Q6ZMY3 1216 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TPRG1Q6ZUI0 275 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TTC30AQ86WT1 665 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 ARFGAP1Q8N6T3 406 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 GRK7Q8WTQ7 553 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 UBLCP1Q8WVY7 318 aaPredicted RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 MRPS31Q92665 395 aaKnown RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TRMT2BQ96GJ1 504 aaKnown RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TNIP3Q96KP6 325 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 SPATA17Q96L03 361 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 MIS12Q9H081 205 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 PIK3R2O00459 728 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TRIM66O15016 1216 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 PPFIA2O75334 1257 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 AP1G2O75843 785 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 GAS8O95995 478 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 KRT10P13645 584 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 ADORA2BP29275 332 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 PTPN7P35236 360 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 STARD6P59095 220 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 ADCY2Q08462 1091 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 FCHO2Q0JRZ9 810 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 UBXN2BQ14CS0 331 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TFDP3Q5H9I0 405 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 KAZNQ674X7 775 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 FAM183BPQ6ZVS7 135 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 MON1AQ86VX9 555 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 CRYBG2Q8N1P7 616 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 ARL14EPQ8N8R7 260 aaPredicted RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 ATL2Q8NHH9 583 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 EXOC4Q96A65 974 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 C8orf48Q96LL4 319 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 PHOX2BQ99453 314 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 FAM118BQ9BPY3 351 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 TXLNGYQ9BZA5 131 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 FAM86C1Q9NVL1 165 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 FEZ2Q9UHY8 353 aaPredicted RBP12.38□□□□□ -0.43
CLIP1-208ENST00000537004 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
CLIP1-208ENST00000537004 KANSL1LA0AUZ9 987 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 GOLGA6CA6NDK9 693 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 TULP2O00295 520 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 TJP3O95049 919 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 KRT7P08729 469 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 GOLGA6DP0CG33 693 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 SETSIPP0DME0 302 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 IL1R2P27930 398 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 RGS7P49802 495 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ZXDBP98169 803 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 NHLH1Q02575 133 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 TAF10Q12962 218 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
CLIP1-208ENST00000537004 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 TRIM68Q6AZZ1 485 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
CLIP1-208ENST00000537004 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 PJA1Q8NG27 643 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 IRF7Q92985 503 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ART4Q93070 314 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ARL8AQ96BM9 186 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 SMOQ99835 787 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ZWILCHQ9H900 591 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 TDP1Q9NUW8 608 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 GOLGA6AQ9NYA3 693 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 UXTQ9UBK9 157 aaPredicted RBP12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ATP8A1Q9Y2Q0 1164 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 hCG_1818297A0A087WSY0 165 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 FAM170BA6NMN3 283 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 RNF8O76064 485 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 CKMP06732 381 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 CDKN2BP42772 138 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 PGFP49763 221 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ZNF143P52747 638 aaPredicted RBP12.37□□□□□ -0.43
CLIP1-208ENST00000537004 MAP3K7CLP57077 242 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 CALCOCO2Q13137 446 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 PTK6Q13882 451 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ACAP1Q15027 740 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 SMTNL2Q2TAL5 461 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 ARHGAP17Q68EM7 881 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 BPIFB1Q8TDL5 484 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 SLC35F5Q8WV83 523 aa12.37□□□□□ -0.43
CLIP1-208ENST00000537004 PIWIL1Q96J94 861 aaKnown RBP12.37□□□□□ -0.43
CLIP1-208ENST00000537004 DDX23Q9BUQ8 820 aaKnown RBP12.37□□□□□ -0.43
CLIP1-208ENST00000537004 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms