RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 RAB27AP51159 221 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 TAF10Q12962 218 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 USP4Q13107 963 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 EFHC1Q5JVL4 640 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 RFWD3Q6PCD5 774 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 C16orf87Q6PH81 154 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 SRRM1Q8IYB3 904 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 RYBPQ8N488 228 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 DNAJC9Q8WXX5 260 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 EXOC2Q96KP1 924 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 RPRD1AQ96P16 312 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 COLEC11Q9BWP8 271 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 IGFLR1Q9H665 355 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 DMAP1Q9NPF5 467 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 ABCF3Q9NUQ8 709 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 CHCHD3Q9NX63 227 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 CHD7Q9P2D1 2997 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 HOXA2O43364 376 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 HSPA1AP0DMV8 641 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 HSPA1BP0DMV9 641 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 HOXD11P31277 338 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 MRPS5P82675 430 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 FASTKD3Q14CZ7 662 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PSMD5Q16401 504 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 C6orf118Q5T5N4 469 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 FUT10Q6P4F1 479 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 GRK7Q8WTQ7 553 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PYROXD1Q8WU10 500 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 FAXDC2Q96IV6 333 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 IQCGQ9H095 443 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 AVENQ9NQS1 362 aaPredicted RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 GKN1Q9NS71 199 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PIGVQ9NUD9 493 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 GMIPQ9P107 970 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 NEU2Q9Y3R4 380 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 URB1O60287 2271 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 ARHGAP42A6NI28 874 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 BUD23O43709 281 aaKnown RBP8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PMPCBO75439 489 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PFKMP08237 780 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PRLRP16471 622 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 SSTR1P30872 391 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 MAXP61244 160 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 ARL13BQ3SXY8 428 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 SH2D4BQ5SQS7 431 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 SLC25A41Q8N5S1 370 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 ARFGAP1Q8N6T3 406 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 PPP1R14CQ8TAE6 165 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 SLC35F5Q8WV83 523 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 CAVIN3Q969G5 261 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 ENTPD7Q9NQZ7 604 aa8.47□□□□□ -1.05
ABCA4-207ENST00000536513 C2CD4BA6NLJ0 364 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 A8MX80 341 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 FAM72CH0Y354 149 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 MAP3K7O43318 606 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 JCHAINP01591 159 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 CKMP06732 381 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 BRAFP15056 766 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 ZNF132P52740 706 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 HDAC4P56524 1084 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 MRPS35P82673 323 aaKnown RBP8.46□□□□□ -1.05
ABCA4-207ENST00000536513 DYNC1I2Q13409 638 aaKnown RBP8.46□□□□□ -1.05
ABCA4-207ENST00000536513 EML3Q32P44 896 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 ERMARDQ5T6L9 678 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 FAM72AQ5TYM5 149 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 PLPP4Q5VZY2 271 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 FAM72DQ6L9T8 149 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 DCLRE1AQ6PJP8 1040 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 SLC39A5Q6ZMH5 540 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 C4orf50Q6ZRC1 276 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 TPGS1Q6ZTW0 290 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 SPATA21Q7Z572 469 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 CHSY1Q86X52 802 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 FAM72BQ86X60 149 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 C4orf33Q8N1A6 199 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 EXD1Q8NHP7 514 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 OLIG1Q8TAK6 271 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 ERP27Q96DN0 273 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 PIF1Q9H611 641 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 POPDC2Q9HBU9 364 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 CHST12Q9NRB3 414 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 OR12D3Q9UGF7 316 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 DCTN4Q9UJW0 460 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.46□□□□□ -1.05
ABCA4-207ENST00000536513 EXOC1LA0A1B0GW35 172 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 MYL4P12829 197 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 COPS2P61201 443 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 IL9RQ01113 521 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 ZNF844Q08AG5 666 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 TFDP2Q14188 446 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 ARHGAP22Q7Z5H3 698 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 SPRED2Q7Z698 418 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 NT5DC4Q86YG4 428 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 PNPLA1Q8N8W4 532 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 LINC01599Q8WXQ3 324 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 LRRC37BQ96QE4 947 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms