RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MOCS2O96007 188 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 IGLV3-19P01714 112 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 ZNF883P0CG24 379 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 SLC2A3P11169 496 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 HLA-EP13747 358 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 ABCB4P21439 1286 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 BRD2P25440 801 aaKnown RBP13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 NNTQ13423 1086 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 CAMK2GQ13555 558 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 PIK3R6Q5UE93 754 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 FOXR2Q6PJQ5 311 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 CHSY1Q86X52 802 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 EHBP1Q8NDI1 1231 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 RHBDD1Q8TEB9 315 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 SLC35F5Q8WV83 523 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 PDCL3Q9H2J4 239 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 KIAA1522Q9P206 1035 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 TPX2Q9ULW0 747 aaKnown RBP13.75□□□□□ -0.21
CLSTN3-205ENST00000535452 FAM47DPA6NHR8 397 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 F5H5T6 163 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 THAP12O43422 761 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 GNA15P30679 374 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 CCT8P50990 548 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 PMS1P54277 932 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 RABGAP1LQ5R372 815 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 TTC39BQ5VTQ0 682 aaPredicted RBP13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 PMF1Q6P1K2 205 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 OR2I1PQ8NGU4 316 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 SPATA20Q8TB22 786 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 ERCC4Q92889 916 aaPredicted RBP13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 ACE2Q9BYF1 805 aaPredicted RBP13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 POPDC2Q9HBU9 364 aa13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 UBE2TQ9NPD8 197 aaPredicted RBP13.74□□□□□ -0.21
CLSTN3-205ENST00000535452 MYO18AQ92614 2054 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 BIN1O00499 593 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 LETM1O95202 739 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 SRPRAP08240 638 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CD59P13987 128 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CD27P26842 260 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 GRIA4P48058 902 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 COPAP53621 1224 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CDK17Q00537 523 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 SULT2A1Q06520 285 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CCDC15Q0P6D6 951 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 HLA-BQ31612 363 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 USP30Q70CQ3 517 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 SCUBE3Q8IX30 993 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CHCHD4Q8N4Q1 142 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 FIBINQ8TAL6 211 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 BTN2A3PQ96KV6 586 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 TMEM245Q9H330 911 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CD248Q9HCU0 757 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CD93Q9NPY3 652 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 FBXL12Q9NXK8 326 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 CLEC4EQ9ULY5 219 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 PAXBP1Q9Y5B6 917 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 PCDHGB2Q9Y5G2 931 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
CLSTN3-205ENST00000535452 EDDM13A0A1B0GTR0 161 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 A0A1B0GVT2 93 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 TARSL2A2RTX5 802 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 KCNJ18B7U540 433 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 RNASEH2AO75792 299 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 LUC7L3O95232 432 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 FTH1P19P0C7X4 201 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 CSKP41240 450 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 GRK6P43250 576 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 STX17P56962 302 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 YWHAZP63104 245 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 SLC12A1Q13621 1099 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 MEA1Q16626 185 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 HS1BP3Q53T59 392 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■□ 21.7
CLSTN3-205ENST00000535452 ADIPOR2Q86V24 386 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 GALNT15Q8N3T1 639 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 ZNF366Q8N895 744 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 KDM1BQ8NB78 822 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 DQX1Q8TE96 717 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 STK32AQ8WU08 396 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 ADAMTS14Q8WXS8 1223 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 TFAP2BQ92481 460 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 INTS2Q9H0H0 1204 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 PRSS16Q9NQE7 514 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
CLSTN3-205ENST00000535452 KLK13Q9UKR3 277 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms