RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TIGD7Q6NT04 549 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 ZBTB46Q86UZ6 589 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 NT5DC4Q86YG4 428 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 DDHD1Q8NEL9 900 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PRCCQ92733 491 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 VANGL2Q9ULK5 521 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 GRK4P32298 578 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 RNASE12Q5GAN4 147 aaKnown RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 OVOS1Q6IE37 1185 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 RGL4Q8IZJ4 473 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 COPS5Q92905 334 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 SLC5A5Q92911 643 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 MROH8Q9H579 483 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 TMEM191CA6NGB0 347 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 HNRNPRO43390 633 aaKnown RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 RNASEH1O60930 286 aaKnown RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 ZNF37AP17032 561 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 OR1E1P30953 314 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PDK2Q15119 407 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 ERMARDQ5T6L9 678 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 LRRC6Q86X45 466 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PALB2Q86YC2 1186 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 HERC6Q8IVU3 1022 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PPP1R2P1Q96PQ5 205 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 RIBC2Q9H4K1 309 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 EFR3BQ9Y2G0 817 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 USP12O75317 370 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PDPK2PQ6A1A2 396 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PROSER1Q86XN7 944 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 C17orf75Q9HAS0 396 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 TMEM39AQ9NV64 488 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 OR6A2O95222 327 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 EGFRP00533 1210 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 ERCC2P18074 760 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 CCSAPQ6IQ19 270 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 ZNF280DQ6N043 979 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 CYP2R1Q6VVX0 501 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
SPG11-203ENST00000535302 CASP10Q92851 521 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 CDCA5Q96FF9 252 aa12.91□□□□□ -0.34
SPG11-203ENST00000535302 TRDMT1O14717 391 aaKnown RBP12.9□□□□□ -0.34
SPG11-203ENST00000535302 TUBP50607 506 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 USP7Q93009 1102 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 LRRC40Q9H9A6 602 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 ANKRD63C9JTQ0 380 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 HS6ST1O60243 411 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 ITGALP20701 1170 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 ZCWPW2Q504Y3 356 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 LGI2Q8N0V4 545 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 RMND5AQ9H871 391 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 SAE1Q9UBE0 346 aaPredicted RBP12.9□□□□□ -0.34
SPG11-203ENST00000535302 TEX28O15482 410 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 OR6B1O95007 311 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 BDNFP23560 247 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 LHX1P48742 406 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 MAPKAPK2P49137 400 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 IRX1P78414 480 aaPredicted RBP12.9□□□□□ -0.34
SPG11-203ENST00000535302 SEC23AQ15436 765 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 SLC2A14Q8TDB8 520 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 RSPH1Q8WYR4 309 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
SPG11-203ENST00000535302 PABPC3Q9H361 631 aaKnown RBP12.9□□□□□ -0.34
SPG11-203ENST00000535302 TLR8Q9NR97 1041 aaKnown RBP12.9□□□□□ -0.34
SPG11-203ENST00000535302 LNPEPQ9UIQ6 1025 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 GLI1P08151 1106 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 MUTP22033 750 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 METTL7BQ6UX53 244 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 CNGB3Q9NQW8 809 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 AP5Z1O43299 807 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 TCEA3O75764 348 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 ATG7O95352 703 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 KRT16P08779 473 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 MSH3P20585 1137 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 MYOCQ99972 504 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 RGS18Q9NS28 235 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 PLAGL2Q9UPG8 496 aa12.9□□□□□ -0.34
SPG11-203ENST00000535302 MFN2O95140 757 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 ALDH5A1P51649 535 aaPredicted RBP12.9□□□□□ -0.35
SPG11-203ENST00000535302 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 LRRC74BQ6ZQY2 392 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 CDH24Q86UP0 819 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 GINS4Q9BRT9 223 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 PHACTR1Q9C0D0 580 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.35
SPG11-203ENST00000535302 GAKO14976 1311 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 MEGF6O75095 1541 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 A0A087X0B3 334 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 BUD23O43709 281 aaKnown RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 TRIM3O75382 744 aaPredicted RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 TBX4P57082 545 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms