RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CCDC85BQ15834 202 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-204ENST00000535005 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
SCARB1-204ENST00000535005 LACTB2Q53H82 288 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-204ENST00000535005 BOLA3Q53S33 107 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 SPDYCQ5MJ68 293 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 POTEHQ6S545 545 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 PEX26Q7Z412 305 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 POLNQ7Z5Q5 900 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 MIB1Q86YT6 1006 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 FCRL2Q96LA5 508 aaPredicted RBP12.73□□□□□ -0.37
SCARB1-204ENST00000535005 ARHGEF38Q9NXL2 777 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 AMFRQ9UKV5 643 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
SCARB1-204ENST00000535005 C5orf60A6NFR6 353 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 KCNU1A8MYU2 1149 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 MIF4GDA9UHW6 222 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 MSI1O43347 362 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 PRPSAP2O60256 369 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CKMP06732 381 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 MBL2P11226 248 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CTNNA2P26232 953 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CCR1P32246 355 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ADRA1BP35368 520 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ATXN1P54253 815 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 TAS2R40P59535 323 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 SCAPQ12770 1279 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CEP85LQ5SZL2 805 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 MEI1Q5TIA1 1274 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CYP4V2Q6ZWL3 525 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 PSTKQ8IV42 348 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CCDC13Q8IYE1 715 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 TEKT4Q8WW24 435 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 FGF13Q92913 245 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 AZIN2Q96A70 460 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 PLD4Q96BZ4 506 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 HES6Q96HZ4 224 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 TMBIM4Q9HC24 238 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 RBM12Q9NTZ6 932 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 USP18Q9UMW8 372 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 PCDHA3Q9Y5H8 950 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ZFP37Q9Y6Q3 630 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 PSTPIP1O43586 416 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 FTCDO95954 541 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 KRT7P08729 469 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 TCF4P15884 667 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 IL1R2P27930 398 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CTNNA1P35221 906 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 AVPR1AP37288 418 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 SNCBQ16143 134 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ZC3H12AQ5D1E8 599 aaKnown RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 NUGGCQ68CJ6 796 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 SCYL2Q6P3W7 929 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 FAM131BQ86XD5 332 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 UNC45BQ8IWX7 931 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 KIAA1958Q8N8K9 716 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ADAMTS19Q8TE59 1207 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ING5Q8WYH8 240 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 HLA-CQ95604 372 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 ZSWIM3Q96MP5 696 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 PEBP4Q96S96 227 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 TRPV4Q9HBA0 871 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 GKN1Q9NS71 199 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
SCARB1-204ENST00000535005 CPQQ9Y646 472 aa12.72□□□□□ -0.37
SCARB1-204ENST00000535005 SYNJ2BP-COX16A0A087WUM0 186 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 GMNCA6NCL1 334 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 H3BQ06 376 aaPredicted RBP12.71□□□□□ -0.38
SCARB1-204ENST00000535005 STC2O76061 302 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 MYZAPP0CAP1 466 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 KCNA5P22460 613 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 PEX5P50542 639 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 ZXDBP98169 803 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 CBX2Q14781 532 aaPredicted RBP12.71□□□□□ -0.38
SCARB1-204ENST00000535005 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.38
SCARB1-204ENST00000535005 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 ACBD5Q5T8D3 534 aaPredicted RBP12.71□□□□□ -0.38
SCARB1-204ENST00000535005 RNF34Q969K3 372 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 SGSM3Q96HU1 749 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 HAPLN3Q96S86 360 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 DCLK3Q9C098 648 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 POMKQ9H5K3 350 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 SLITRK6Q9H5Y7 841 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 KIF9Q9HAQ2 790 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 TDP1Q9NUW8 608 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 COX16Q9P0S2 106 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 PCSK1NQ9UHG2 260 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 FZD10Q9ULW2 581 aa12.71□□□□□ -0.38
SCARB1-204ENST00000535005 GRXCR2A6NFK2 248 aa12.7□□□□□ -0.38
SCARB1-204ENST00000535005 I6L893 689 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms