RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CCDC196	A0A1B0GTZ2	297 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	LOC102723971	A0A1B0GUV8	181 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	TCRBV5S1A1T	A0A578	114 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	ASNA1	O43681	348 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	EXOC3	O60645	756 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	PDE8B	O95263	885 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	A1BG	P04217	495 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CHRM5	P08912	532 aa	Predicted RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	GABRB3	P28472	473 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	EPHA3	P29320	983 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	MPG	P29372	298 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	UQCRC1	P31930	480 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	GK	P32189	559 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CARS	P49589	748 aa	Known RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CCR5	P51681	352 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	KRTAP10-11	P60412	298 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	UBE3A	Q05086	875 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	KRT32	Q14532	448 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	DLGAP5	Q15398	846 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	SLC18B1	Q6NT16	456 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	TMCO3	Q6UWJ1	677 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	TCP11L2	Q8N4U5	519 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	PNLDC1	Q8NA58	520 aa	Known RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	C8orf58	Q8NAV2	365 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	TDRD7	Q8NHU6	1098 aa	Known RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	ADAMTS15	Q8TE58	950 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	TMEM171	Q8WVE6	324 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CTHRC1	Q96CG8	243 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	LRRC46	Q96FV0	321 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CCDC17	Q96LX7	622 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	ZMAT2	Q96NC0	199 aa	Known RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	PRR25	Q96S07	402 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CCDC68	Q9H2F9	335 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	MLXIP	Q9HAP2	919 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	NRIP3	Q9NQ35	241 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	RGL1	Q9NZL6	768 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	DNMT3B	Q9UBC3	853 aa	Known RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	DRG1	Q9Y295	367 aa	Known RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	MAGED1	Q9Y5V3	778 aa	Predicted RBP	5.17	□□□□□ -1.58
ATM-223	ENST00000533979	CDY1	Q9Y6F8	540 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	MAPKBP1	O60336	1514 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	TOPBP1	Q92547	1522 aa		5.17	□□□□□ -1.58
ATM-223	ENST00000533979	ABCC8	Q09428	1581 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	MAGI1	Q96QZ7	1491 aa	Predicted RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	UBE2Q2L	H0YL09	131 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	TOM1	O60784	492 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	ITGA2B	P08514	1039 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	TGFB3	P10600	412 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	IL1R1	P14778	569 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	AKR1B1	P15121	316 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	EPHB2	P29323	1055 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	STAT1	P42224	750 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	TIRAP	P58753	221 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	E2F1	Q01094	437 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	ARHGEF7	Q14155	803 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	DAZAP2	Q15038	168 aa	Predicted RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	ARHGAP15	Q53QZ3	475 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	RNASE12	Q5GAN4	147 aa	Known RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	MORN5	Q5VZ52	161 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	RRAGB	Q5VZM2	374 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	ZNF626	Q68DY1	528 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	FCRL6	Q6DN72	434 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	UNC13D	Q70J99	1090 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	RNF44	Q7L0R7	432 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	YTHDF3	Q7Z739	585 aa	Known RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	GALNT16	Q8N428	558 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	RPL36AL	Q969Q0	106 aa	Known RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	MAGEB5	Q9BZ81	275 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	RETREG1	Q9H6L5	497 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	TRIM36	Q9NQ86	728 aa		5.16	□□□□□ -1.58
ATM-223	ENST00000533979	GAR1	Q9NY12	217 aa	Known RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	ORC3	Q9UBD5	711 aa	Predicted RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	HERC5	Q9UII4	1024 aa	Known RBP	5.16	□□□□□ -1.58
ATM-223	ENST00000533979	HMX3	A6NHT5	357 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979		B4DLN1	442 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	BTBD19	C9JJ37	291 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	RASSF9	O75901	435 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	RTN3	O95197	1032 aa	Predicted RBP	5.15	□□□□□ -1.59
ATM-223	ENST00000533979	VNN1	O95497	513 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	BTF3	P20290	206 aa	Known RBP	5.15	□□□□□ -1.59
ATM-223	ENST00000533979	KLRC1	P26715	233 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	GATM	P50440	423 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	PNLIPRP1	P54315	467 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	PRKAA2	P54646	552 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	CASP6	P55212	293 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	POLE2	P56282	527 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	SUMO2	P61956	95 aa	Known RBP	5.15	□□□□□ -1.59
ATM-223	ENST00000533979	CHRND	Q07001	517 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	SLC29A2	Q14542	456 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	HAUS3	Q68CZ6	603 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	KLHL17	Q6TDP4	642 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	KIRREL2	Q6UWL6	708 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	CCDC129	Q6ZRS4	1044 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	GATAD2A	Q86YP4	633 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	DNAJB14	Q8TBM8	379 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	AFG1L	Q8WV93	481 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	ST8SIA4	Q92187	359 aa		5.15	□□□□□ -1.59
ATM-223	ENST00000533979	ZUFSP	Q96AP4	578 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms