RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 GAB3Q8WWW8 586 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 GABRG3Q99928 467 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 WDCPQ9H6R7 721 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 ABCB8Q9NUT2 735 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 ELOVL2Q9NXB9 296 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 IFNKQ9P0W0 207 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 XPO7Q9UIA9 1087 aaKnown RBP16.39■□□□□ 0.21
TSKU-204ENST00000533752 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 GPR179Q6PRD1 2367 aa16.39■□□□□ 0.21
TSKU-204ENST00000533752 GVINP1Q7Z2Y8 2422 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 OTOGLQ3ZCN5 2332 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 ANKRD62A6NC57 917 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 RPP40O75818 363 aaKnown RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 SDC4P31431 198 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 RPS24P62847 133 aaKnown RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 KLHL30Q0D2K2 578 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 PTP4A2Q12974 167 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 STARD3Q14849 445 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 TMEM92Q6UXU6 159 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 CEP68Q76N32 757 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 FIBINQ8TAL6 211 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 SYN2Q92777 582 aaPredicted RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 TBCBQ99426 244 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 PRMT1Q99873 361 aaKnown RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 SYT11Q9BT88 431 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 SELENOOQ9BVL4 669 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 CIPCQ9C0C6 399 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 PIGVQ9NUD9 493 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 POLR3BQ9NW08 1133 aaPredicted RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 ARHGEF38Q9NXL2 777 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 STIM2Q9P246 746 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
TSKU-204ENST00000533752 THAP10Q9P2Z0 257 aaPredicted RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 CLEC4EQ9ULY5 219 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
TSKU-204ENST00000533752 ITIH6Q6UXX5 1313 aa16.38■□□□□ 0.21
TSKU-204ENST00000533752 EP300Q09472 2414 aaPredicted RBP16.37■□□□□ 0.21
TSKU-204ENST00000533752 A0A1B0GVM2 712 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 TCRBV21S2A2A0A5A6 115 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 FAM170AA1A519 330 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 TCAF2A6NFQ2 919 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
TSKU-204ENST00000533752 KRT3P12035 628 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 DESP17661 470 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 PXNP49023 591 aaPredicted RBP16.37■□□□□ 0.21
TSKU-204ENST00000533752 OXCT1P55809 520 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 ZBED6P86452 979 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 USP39Q53GS9 565 aaKnown RBP16.37■□□□□ 0.21
TSKU-204ENST00000533752 LAIR1Q6GTX8 287 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 ACAD10Q6JQN1 1059 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 DNAJC24Q6P3W2 148 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 PRR23BQ6ZRT6 265 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 CHST9Q7L1S5 443 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 KIAA0907Q7Z7F0 614 aaPredicted RBP16.37■□□□□ 0.21
TSKU-204ENST00000533752 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 CARNMT1Q8N4J0 409 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 MDGA1Q8NFP4 955 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 RUBCNQ92622 972 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 TKTL2Q9H0I9 626 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 HAUS4Q9H6D7 363 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 ZDHHC4Q9NPG8 344 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 CACNA2D2Q9NY47 1150 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 GMEB2Q9UKD1 530 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 HCN2Q9UL51 889 aa16.37■□□□□ 0.21
TSKU-204ENST00000533752 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.37■□□□□ 0.21
TSKU-204ENST00000533752 PTPRZ1P23471 2315 aaPredicted RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 DMDP11532 3685 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 ANTXRLA6NF34 631 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 H0Y626 953 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 HRO43593 1189 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 PAGE1O75459 146 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 MOCS3O95396 460 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 PDGFRAP16234 1089 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 POLR2EP19388 210 aaKnown RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 PTPN9P43378 593 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 ENPP2Q13822 863 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 AUHQ13825 339 aaKnown RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 BYSLQ13895 437 aaKnown RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 TRIM14Q14142 442 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 BNIPLQ7Z465 357 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 RXFP2Q8WXD0 754 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 SPACA7Q96KW9 195 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 CFAP57Q96MR6 1250 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 RPRD1AQ96P16 312 aaPredicted RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 ACOX2Q99424 681 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 XPO4Q9C0E2 1151 aaKnown RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 CALCOCO1Q9P1Z2 691 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 KIAA1522Q9P206 1035 aaPredicted RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 NCDNQ9UBB6 729 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 CAPN11Q9UMQ6 739 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 PLA2G4CQ9UP65 541 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 LUC7L2Q9Y383 392 aaKnown RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 HS3ST4Q9Y661 456 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 STON1Q9Y6Q2 735 aa16.36■□□□□ 0.21
TSKU-204ENST00000533752 MYO18AQ92614 2054 aaKnown RBP16.36■□□□□ 0.21
TSKU-204ENST00000533752 C2CD4BA6NLJ0 364 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 SIGLEC16A6NMB1 481 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms