RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 NCKAP1Q9Y2A7 1128 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 PCDHB1Q9Y5F3 818 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CLIC4Q9Y696 253 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 BOD1L1Q8NFC6 3051 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 FAM47DPA6NHR8 397 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 LRRC72A6NJI9 287 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 LRRIQ3A6PVS8 624 aaPredicted RBP8.14□□□□□ -1.11
NXF1-215ENST00000533440 TLR4O00206 839 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 STX6O43752 255 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 PABPC1P11940 636 aaKnown RBP8.14□□□□□ -1.11
NXF1-215ENST00000533440 P4HA1P13674 534 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 ZNF445P59923 1031 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 ERVPABLB-1P60509 514 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 INCA1Q0VD86 236 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 SFSWAPQ12872 951 aaKnown RBP8.14□□□□□ -1.11
NXF1-215ENST00000533440 BIRC3Q13489 604 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 TRIP4Q15650 581 aaPredicted RBP8.14□□□□□ -1.11
NXF1-215ENST00000533440 CDCP2Q5VXM1 449 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 MBLAC2Q68D91 279 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 KDM7AQ6ZMT4 941 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 SPATS2Q86XZ4 545 aaKnown RBP8.14□□□□□ -1.11
NXF1-215ENST00000533440 AHI1Q8N157 1196 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 PARD3BQ8TEW8 1205 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 KCNE4Q8WWG9 221 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 TAF4BQ92750 862 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 PLD4Q96BZ4 506 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 TWNKQ96RR1 684 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 ARID3AQ99856 593 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 NEUROG2Q9H2A3 272 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 ABCB8Q9NUT2 735 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 MARCH2Q9P0N8 246 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 GGA2Q9UJY4 613 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 STOML2Q9UJZ1 356 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 STRIP2Q9ULQ0 834 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 FZD4Q9ULV1 537 aa8.14□□□□□ -1.11
NXF1-215ENST00000533440 TPX2Q9ULW0 747 aaKnown RBP8.14□□□□□ -1.11
NXF1-215ENST00000533440 UBE4BO95155 1302 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 A0A1W2PP55 124 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SLC12A8A0AV02 714 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 K7ENP7 123 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 TRIM38O00635 465 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 MID1O15344 667 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 KLK10O43240 276 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 LATO43561 262 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SIGLEC6O43699 453 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SIN3BO75182 1162 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 ASS1P00966 412 aaKnown RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 RPN1P04843 607 aaKnown RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 MPOP05164 745 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 ATP5BP06576 529 aaKnown RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 ASPAP45381 313 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 LSSP48449 732 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SKOR1P84550 965 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 EHHADHQ08426 723 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 ZNF211Q13398 564 aaPredicted RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 CST6Q15828 149 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SGSM1Q2NKQ1 1148 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 ZACNQ401N2 412 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SLC45A4Q5BKX6 768 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 FAM26FQ5R3K3 315 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 CNNM4Q6P4Q7 775 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 INO80CQ6PI98 192 aaPredicted RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 IQCHQ86VS3 1027 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 ARHGAP18Q8N392 663 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 WFDC5Q8TCV5 224 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 GANCQ8TET4 914 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 TTC17Q96AE7 1141 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 TMA16Q96EY4 203 aaKnown RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 TMX3Q96JJ7 454 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 SERAC1Q96JX3 654 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 LMLNQ96KR4 655 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 DUSP16Q9BY84 665 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 PANK2Q9BZ23 570 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 TNMDQ9H2S6 317 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 MTG2Q9H4K7 406 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 ASCL3Q9NQ33 180 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 KBTBD4Q9NVX7 518 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 CGNQ9P2M7 1197 aaKnown RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 IL17BQ9UHF5 180 aa8.13□□□□□ -1.11
NXF1-215ENST00000533440 MORC2Q9Y6X9 1032 aaPredicted RBP8.13□□□□□ -1.11
NXF1-215ENST00000533440 RELNP78509 3460 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 EXOC3O60645 756 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 RNASEH1O60930 286 aaKnown RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 GABBR2O75899 941 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 CLSTN1O94985 981 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 LATS1O95835 1130 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 SLFN14P0C7P3 912 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 POLR2EP19388 210 aaKnown RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 CD70P32970 193 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 HARS2P49590 506 aaKnown RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 SGSHP51688 502 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 ADPRHP54922 357 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 GABREP78334 506 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 HNRNPA1L2Q32P51 320 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms