RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PAXBP1Q9Y5B6 917 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 HS3ST4Q9Y661 456 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 F5H5T6 163 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 RNF40O75150 1001 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 ADRA1BP35368 520 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 GGCXP38435 758 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 TNFRSF4P43489 277 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 NUBP1P53384 320 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 MTAPQ13126 283 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 AUHQ13825 339 aaKnown RBP12.4□□□□□ -0.42
SSBP3-214ENST00000533209 PREPLQ4J6C6 727 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-214ENST00000533209 FBXL22Q6P050 247 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 PKN3Q6P5Z2 889 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
SSBP3-214ENST00000533209 C14orf80Q86SX3 495 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 ZNF683Q8IZ20 524 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 CFAP52Q8N1V2 620 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 ARFGAP1Q8N6T3 406 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 FNIP1Q8TF40 1166 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 SIK2Q9H0K1 926 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.42
SSBP3-214ENST00000533209 STIM2Q9P246 746 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 SNX10Q9Y5X0 201 aa12.4□□□□□ -0.42
SSBP3-214ENST00000533209 TBC1D3BA6NDS4 549 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 PRRT4C9JH25 899 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-214ENST00000533209 PSMA2P25787 234 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 KIR2DL1P43626 348 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-214ENST00000533209 IRAK1P51617 712 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 SEC13P55735 322 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 C5orf22Q49AR2 442 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 MAMSTRQ6ZN01 415 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 CCDC185Q8N715 623 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 USP33Q8TEY7 942 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 IGSF8Q969P0 613 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 LMLNQ96KR4 655 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 C1orf74Q96LT6 269 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 HAPLN3Q96S86 360 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 IER2Q9BTL4 223 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 NUP85Q9BW27 656 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 MAGEB5Q9BZ81 275 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 SPATA6Q9NWH7 488 aaPredicted RBP12.39□□□□□ -0.43
SSBP3-214ENST00000533209 C2orf42Q9NWW7 574 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 IMPACTQ9P2X3 320 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 HCN2Q9UL51 889 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 VANGL2Q9ULK5 521 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 KMT2EQ8IZD2 1858 aa12.39□□□□□ -0.43
SSBP3-214ENST00000533209 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 CHURC1-FNTBB4DL54 471 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 LUC7L3O95232 432 aaKnown RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 TMEM253P0C7T8 217 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 HLA-FP30511 346 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 SCAPQ12770 1279 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 GEN1Q17RS7 908 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 RABGAP1LQ5R372 815 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 ACBD5Q5T8D3 534 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 TTC39BQ5VTQ0 682 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 KIAA0907Q7Z7F0 614 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 CIR1Q86X95 450 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 C1orf210Q8IVY1 113 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 CCDC170Q8IYT3 715 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 MAML2Q8IZL2 1156 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 SPEM1Q8N4L4 309 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 RPLP0P6Q8NHW5 317 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 FIBINQ8TAL6 211 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 NTAN1Q96AB6 310 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 RPRD1AQ96P16 312 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-214ENST00000533209 ABCB8Q9NUT2 735 aa12.38□□□□□ -0.43
SSBP3-214ENST00000533209 KIAA1549LQ6ZVL6 1849 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 WDFY4Q6ZS81 3184 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 IGLV3-10A0A075B6K4 115 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 A0A1B0GVM2 712 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 TCAF2A6NFQ2 919 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 SOWAHDA6NJG2 315 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 E9PAM4 449 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 FAM72CH0Y354 149 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 CNTN5O94779 1100 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 LCA5LO95447 670 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 DESP17661 470 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 CD70P32970 193 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 MRPS21P82921 87 aaKnown RBP12.37□□□□□ -0.43
SSBP3-214ENST00000533209 SATB1Q01826 763 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 NRG1Q02297 640 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-214ENST00000533209 ARL13BQ3SXY8 428 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 FSCBQ5H9T9 825 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 FAM72AQ5TYM5 149 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 MANEALQ5VSG8 457 aa12.37□□□□□ -0.43
SSBP3-214ENST00000533209 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms