RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NAT10Q9H0A0 1025 aaKnown RBP31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 SLC6A17Q9H1V8 727 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 SMOC1Q9H4F8 434 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 NLRC4Q9NPP4 1024 aa31.39■■■□□ 2.62
SSSCA1-207ENST00000533115 SYNJ2BP-COX16A0A087WUM0 186 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 KCNU1A8MYU2 1149 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 SYNCRIPO60506 623 aaKnown RBP31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 ZNF217O75362 1048 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 GFPT2O94808 682 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 CAVIN2O95810 425 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 MMEP08473 750 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 TACR2P21452 398 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 CD70P32970 193 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 NOS2P35228 1153 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 DHPSP49366 369 aaPredicted RBP31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 JAM2P57087 298 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 RAP1GAP2Q684P5 730 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 ERICH1Q86X53 443 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 ZNF677Q86XU0 584 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 LGI2Q8N0V4 545 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 NETO1Q8TDF5 533 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 C18orf8Q96DM3 657 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 COX16Q9P0S2 106 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 PLA2G4CQ9UP65 541 aa31.38■■■□□ 2.61
SSSCA1-207ENST00000533115 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 LOC105378220A0A1B0GUY1 285 aaPredicted RBP31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 ABCB4P21439 1286 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 PRKCHP24723 683 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 CCR1P32246 355 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 SOX5P35711 763 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 UBXN1Q04323 297 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 ANO6Q4KMQ2 910 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 AASDHQ4L235 1098 aaPredicted RBP31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 SPDYCQ5MJ68 293 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 MBLAC2Q68D91 279 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 CAVIN1Q6NZI2 390 aaKnown RBP31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 SERPINA13PQ6UXR4 307 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 ERMP1Q7Z2K6 904 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 CHSY1Q86X52 802 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 TMEFF1Q8IYR6 380 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 CFAP52Q8N1V2 620 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 CARNMT1Q8N4J0 409 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 CYB5D2Q8WUJ1 264 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 RNF34Q969K3 372 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 LMLNQ96KR4 655 aa31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 PCMTD1Q96MG8 357 aaPredicted RBP31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 NOCTQ9UK39 431 aaKnown RBP31.37■■■□□ 2.61
SSSCA1-207ENST00000533115 GDF9O60383 454 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 EPHX1P07099 455 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 MATKP42679 507 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 KIAA1324Q6UXG2 1013 aaKnown RBP31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 SLC36A4Q6YBV0 504 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 APTXQ7Z2E3 356 aaKnown RBP31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 DGLUCYQ7Z3D6 616 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 CYP2U1Q7Z449 544 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 CCDC117Q8IWD4 279 aaPredicted RBP31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 NEK11Q8NG66 645 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 SPAG5Q96R06 1193 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 CYP8B1Q9UNU6 501 aa31.36■■■□□ 2.61
SSSCA1-207ENST00000533115 IGHV1OR15-9A0A0B4J2B8 117 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 ATP5BP06576 529 aaKnown RBP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 POLR2EP19388 210 aaKnown RBP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 SCNN1AP37088 669 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 ATXN1P54253 815 aaKnown RBP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 NME3Q13232 169 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 FNDC3BQ53EP0 1204 aaKnown RBP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 XYLT1Q86Y38 959 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 MSANTD4Q8NCY6 345 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 SLC20A1Q8WUM9 679 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 ERGIC2Q96RQ1 377 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 PRMT1Q99873 361 aaKnown RBP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 BPIFA3Q9BQP9 254 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 MKRN2Q9H000 416 aaKnown RBP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 PRDM16Q9HAZ2 1276 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 RRN3Q9NYV6 651 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 NUP205Q92621 2012 aa31.35■■■□□ 2.61
SSSCA1-207ENST00000533115 FAM170AA1A519 330 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 F5H5T6 163 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 AP5Z1O43299 807 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 LUC7L3O95232 432 aaKnown RBP31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 DLDP09622 509 aaKnown RBP31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 STAT1P42224 750 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 RNASE9P60153 205 aaKnown RBP31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 NOMO3P69849 1222 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 CDR2Q01850 454 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 RPL6Q02878 288 aaKnown RBP31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 LMAN2Q12907 356 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 CDH18Q13634 790 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 PTPRNQ16849 979 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 METTL3Q86U44 580 aaKnown RBP31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 CPA5Q8WXQ8 436 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 RTKNQ9BST9 563 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 TMEM245Q9H330 911 aa31.34■■■□□ 2.61
SSSCA1-207ENST00000533115 CKAP5Q14008 2032 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 M0QYT0 321 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 ATP1A3P13637 1013 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 HLA-EP13747 358 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 PTGER3P43115 390 aa31.33■■■□□ 2.61
SSSCA1-207ENST00000533115 MTA1Q13330 715 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms